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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66546 Canola cytosol 90.72 35.2
CDY71858 Canola cytosol, mitochondrion, nucleus, plastid 38.14 29.37
CDY15358 Canola cytosol, extracellular, plastid 37.11 25.71
CDY66545 Canola cytosol, peroxisome, plastid 91.75 24.25
Bra021702.1-P Field mustard cytosol, peroxisome, plastid 98.97 24.06
CDY00206 Canola nucleus 37.11 19.89
CDY29771 Canola cytosol, plastid 45.36 13.21
CDY52273 Canola cytosol, plastid 40.21 13.09
CDY15344 Canola mitochondrion 46.39 13.01
CDY60959 Canola cytosol, mitochondrion, plastid 37.11 13.0
CDY60955 Canola cytosol, extracellular, plastid, vacuole 39.18 12.38
CDX79454 Canola cytosol 38.14 12.29
CDY42091 Canola mitochondrion 38.14 11.97
CDY12260 Canola cytosol 39.18 11.91
CDY42088 Canola cytosol 49.48 11.74
CDY12259 Canola cytosol 39.18 11.73
AT2G31470.1 Thale cress cytosol 45.36 11.37
CDX79453 Canola plastid 44.33 11.32
CDY42089 Canola cytosol 47.42 11.27
CDY30661 Canola cytosol 26.8 11.21
CDY60961 Canola cytosol 45.36 11.08
CDY15359 Canola cytosol, plastid 45.36 11.06
CDY31173 Canola cytosol, mitochondrion 44.33 10.8
CDX70134 Canola cytosol 43.3 10.66
CDY05937 Canola cytosol 37.11 10.65
CDY12239 Canola mitochondrion 29.9 10.39
CDY51358 Canola cytosol 40.21 10.32
CDX98860 Canola cytosol 42.27 10.15
CDY12627 Canola cytosol 41.24 10.05
CDY08137 Canola cytosol 42.27 10.05
CDY72470 Canola golgi, nucleus, plasma membrane 40.21 10.03
CDY19137 Canola cytosol, mitochondrion, plastid 41.24 9.85
CDX83262 Canola cytosol, mitochondrion 40.21 9.8
CDX97551 Canola mitochondrion 39.18 9.69
CDY08136 Canola cytosol 40.21 9.63
CDY10678 Canola cytosol 38.14 9.59
CDY19134 Canola mitochondrion 37.11 9.42
CDY15352 Canola mitochondrion 39.18 9.41
CDY67066 Canola cytosol, mitochondrion, nucleus, peroxisome 39.18 9.38
CDY29772 Canola cytosol 39.18 9.31
CDY15336 Canola plastid 37.11 9.18
CDY72410 Canola cytosol 35.05 9.16
CDY19088 Canola cytosol 38.14 9.14
CDY15332 Canola cytosol 36.08 8.97
CDY19132 Canola mitochondrion 36.08 8.91
CDY15324 Canola cytosol 35.05 8.88
CDY15333 Canola mitochondrion 35.05 8.85
CDY15327 Canola cytosol 34.02 8.57
CDY19127 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 45.36 7.65
CDY08200 Canola cytosol, golgi, mitochondrion, plasma membrane 29.9 6.56
CDY12626 Canola cytosol 24.74 6.42
CDY67859 Canola cytosol, mitochondrion 24.74 6.35
CDY19131 Canola mitochondrion 38.14 6.22
CDY15999 Canola cytosol, mitochondrion 30.93 4.66
CDY26564 Canola mitochondrion 17.53 3.71
CDY15353 Canola cytosol 15.46 2.91
CDY46037 Canola extracellular 3.09 2.21
CDY70182 Canola extracellular 3.09 2.21
CDY15357 Canola cytosol, nucleus, plastid 1.03 1.82
CDY18160 Canola cytosol 3.09 1.69
CDY29942 Canola cytosol 5.15 1.68
CDY15326 Canola cytosol 1.03 0.78
CDY30662 Canola extracellular, mitochondrion 1.03 0.72
CDY70684 Canola cytosol 0.0 0.0
CDY65288 Canola mitochondrion 0.0 0.0
CDY67625 Canola mitochondrion 0.0 0.0
CDX97874 Canola extracellular 0.0 0.0
CDY52272 Canola cytosol 0.0 0.0
CDY42092 Canola cytosol 0.0 0.0
CDY15342 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY65287EnsemblPlantsGene:GSBRNA2T00045532001Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810PANTHER:PTHR31790PANTHER:PTHR31790:SF47PFAM:PF00646
ProteinID:CDY65287ProteinID:CDY65287.1SMART:SM00256SUPFAM:SSF81383UniParc:UPI0004EDC5E3UniProt:A0A078JIW5
MapMan:35.1:::::
Description
BnaAnng20350DBnaAnng20350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIW5]
Coordinates
chrLK034719:+:1921..2214
Molecular Weight (calculated)
11068.3 Da
IEP (calculated)
9.338
GRAVY (calculated)
-0.255
Length
97 amino acids
Sequence
(BLAST)
1: MKSRRRNVSE GHNTILQCHS RTCTEEYSET IPHDLIIEIV SRLPTKSVAR CRCVSKLWSS LLVHPYFTET YLTRSSASPK ILFACVKDGK VSFYTSA
Best Arabidopsis Sequence Match ( AT2G31470.2 )
(BLAST)
001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SECTWRGLVN FCWNDWYK
Arabidopsis Description
DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.