CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67859	Canola	cytosol, mitochondrion	95.99	94.97
Bra034016.1-P	Field mustard	cytosol	98.93	92.04
CDY70182	Canola	extracellular	29.14	80.15
CDY46037	Canola	extracellular	29.14	80.15
CDY12627	Canola	cytosol	72.73	68.34
CDY67625	Canola	mitochondrion	32.35	47.08
CDY15326	Canola	cytosol	15.24	44.53
CDY15357	Canola	cytosol, nucleus, plastid	6.42	43.64
CDY70684	Canola	cytosol	23.8	43.41
CDY65288	Canola	mitochondrion	31.82	43.12
CDY18160	Canola	cytosol	20.32	42.7
CDY42088	Canola	cytosol	45.72	41.81
CDX70134	Canola	cytosol	43.05	40.86
CDY19134	Canola	mitochondrion	40.64	39.79
CDY19088	Canola	cytosol	42.25	39.01
CDY29771	Canola	cytosol, plastid	34.49	38.74
CDY42089	Canola	cytosol	41.98	38.48
CDX98860	Canola	cytosol	41.44	38.37
CDY42092	Canola	cytosol	14.44	38.3
CDY67066	Canola	cytosol, mitochondrion, nucleus, peroxisome	41.44	38.27
CDY15324	Canola	cytosol	39.04	38.12
CDY60961	Canola	cytosol	40.11	37.78
CDY15359	Canola	cytosol, plastid	40.11	37.69
CDY52273	Canola	cytosol, plastid	29.95	37.58
CDY15333	Canola	mitochondrion	38.5	37.5
CDY15332	Canola	cytosol	39.04	37.44
CDX79453	Canola	plastid	37.97	37.37
CDX97551	Canola	mitochondrion	39.04	37.24
CDY08137	Canola	cytosol	40.37	37.01
CDY15336	Canola	plastid	38.77	36.99
CDY05937	Canola	cytosol	33.42	36.98
CDY15327	Canola	cytosol	37.97	36.88
CDY15344	Canola	mitochondrion	33.96	36.71
CDY15352	Canola	mitochondrion	39.57	36.63
CDX79454	Canola	cytosol	29.41	36.54
CDY72410	Canola	cytosol	36.1	36.39
CDY52272	Canola	cytosol	2.14	36.36
CDY29772	Canola	cytosol	39.57	36.27
CDX83262	Canola	cytosol, mitochondrion	38.5	36.18
CDY08136	Canola	cytosol	39.04	36.05
CDY66546	Canola	cytosol	24.06	36.0
CDY66545	Canola	cytosol, peroxisome, plastid	35.29	35.97
CDY19137	Canola	cytosol, mitochondrion, plastid	39.04	35.96
CDY19132	Canola	mitochondrion	37.7	35.88
AT3G61340.2	Thale cress	cytosol	41.71	35.86
CDY31173	Canola	cytosol, mitochondrion	37.97	35.68
CDY42091	Canola	mitochondrion	29.41	35.6
CDY60955	Canola	cytosol, extracellular, plastid, vacuole	29.14	35.5
CDY12239	Canola	mitochondrion	26.47	35.48
CDY72470	Canola	golgi, nucleus, plasma membrane	36.36	34.96
CDY30662	Canola	extracellular, mitochondrion	12.83	34.78
CDY10678	Canola	cytosol	35.83	34.72
CDX97874	Canola	extracellular	24.87	34.7
CDY29942	Canola	cytosol	27.27	34.34
CDY51358	Canola	cytosol	34.22	33.86
CDY60959	Canola	cytosol, mitochondrion, plastid	24.06	32.49
CDY00206	Canola	nucleus	14.97	30.94
CDY08200	Canola	cytosol, golgi, mitochondrion, plasma membrane	35.56	30.09
CDY30661	Canola	cytosol	18.45	29.74
CDY15358	Canola	cytosol, extracellular, plastid	10.16	27.14
CDY19127	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	40.37	26.26
CDY15353	Canola	cytosol	34.49	25.05
CDY65287	Canola	cytosol	6.42	24.74
CDY12259	Canola	cytosol	21.39	24.69
CDY12260	Canola	cytosol	20.59	24.14
CDY19131	Canola	mitochondrion	36.9	23.19
CDY71858	Canola	cytosol, mitochondrion, nucleus, plastid	7.75	23.02
CDY26564	Canola	mitochondrion	21.12	17.25
CDY15999	Canola	cytosol, mitochondrion	24.6	14.29
CDY15342	Canola	cytosol	8.02	13.16

Protein Annotations

EnsemblPlants:CDY12626	EnsemblPlantsGene:GSBRNA2T00070130001	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	PANTHER:PTHR31790	PANTHER:PTHR31790:SF10
PFAM:PF08268	ProteinID:CDY12626	ProteinID:CDY12626.1	TIGRFAMs:TIGR01640	UniParc:UPI0004EEE621	UniProt:A0A078FHH5
MapMan:35.1	:	:	:	:	:

Description

BnaA02g12940DBnaA02g12940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHH5]

Coordinates

chrLK032025:+:322343..323551

Molecular Weight (calculated)

42551.6 Da

IEP (calculated)

8.638

GRAVY (calculated)

-0.133

Length

374 amino acids

Sequence
(BLAST)

001: MKTRRQHAAE NALTISRRST QSPLSNGNSE TIPTDLIIEV LLRLPPKSRA RPQLLLSCVE NEELFLFSIP QEVQNQDVVT ANYHTRFPCG RSSKIIGPVR
101: GLVCLTHLRK YKKTAPVICN PSTGQSLPLP NVKTRSTLVN TFLGFDPVGK QFKILSMTTR DYINCEEHQV LTLGTEKKMS WRKIECSISH YFRHINHGIC
201: INGVVYYVAG LNEPPMANGI VCFDVRSEKF KVINRGEEMA LWSQSTLVNY KGTLGALLTE GFTEVTGETK CFQLWVLVDA EKHEWSKHIS ICLPLLWKNI
301: VANATLFFVG VSGTDEIVLS PKYVSEPYCF YVYYYNIESN AIRRVEIQGM DAFRHCQIRL SLNHVEDVKL LQYI

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.