CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70182	Canola	extracellular	100.0	100.0
CDY15326	Canola	cytosol	41.91	44.53
CDY15357	Canola	cytosol, nucleus, plastid	17.65	43.64
CDY30662	Canola	extracellular, mitochondrion	37.5	36.96
CDY18160	Canola	cytosol	47.79	36.52
CDY52272	Canola	cytosol	5.88	36.36
CDY42092	Canola	cytosol	36.76	35.46
CDY12627	Canola	cytosol	93.38	31.91
CDY12626	Canola	cytosol	80.15	29.14
CDY67859	Canola	cytosol, mitochondrion	78.68	28.31
CDY70684	Canola	cytosol	35.29	23.41
CDX97874	Canola	extracellular	42.65	21.64
CDY67625	Canola	mitochondrion	40.44	21.4
CDX79454	Canola	cytosol	43.38	19.6
CDY12239	Canola	mitochondrion	39.71	19.35
CDY60955	Canola	cytosol, extracellular, plastid, vacuole	43.38	19.22
CDY29771	Canola	cytosol, plastid	44.85	18.32
CDY65288	Canola	mitochondrion	36.76	18.12
CDY51358	Canola	cytosol	49.26	17.72
CDY19088	Canola	cytosol	52.21	17.53
CDY42091	Canola	mitochondrion	39.71	17.48
CDY15333	Canola	mitochondrion	47.79	16.93
CDY67066	Canola	cytosol, mitochondrion, nucleus, peroxisome	50.0	16.79
CDY19134	Canola	mitochondrion	47.06	16.75
CDY42088	Canola	cytosol	49.26	16.38
CDY15336	Canola	plastid	46.32	16.07
CDY15324	Canola	cytosol	44.85	15.93
CDY15332	Canola	cytosol	45.59	15.9
CDY15359	Canola	cytosol, plastid	46.32	15.83
CDY29942	Canola	cytosol	34.56	15.82
CDY60961	Canola	cytosol	45.59	15.62
CDY19137	Canola	cytosol, mitochondrion, plastid	46.32	15.52
CDY05937	Canola	cytosol	38.24	15.38
CDY15327	Canola	cytosol	43.38	15.32
CDX97551	Canola	mitochondrion	44.12	15.31
CDY19132	Canola	mitochondrion	44.12	15.27
CDY42089	Canola	cytosol	45.59	15.2
CDY15352	Canola	mitochondrion	44.85	15.1
CDY72410	Canola	cytosol	40.44	14.82
CDX98860	Canola	cytosol	41.91	14.11
CDX70134	Canola	cytosol	40.44	13.96
AT3G61340.2	Thale cress	cytosol	44.12	13.79
CDY29772	Canola	cytosol	40.44	13.48
CDY52273	Canola	cytosol, plastid	29.41	13.42
CDY08137	Canola	cytosol	39.71	13.24
CDY72470	Canola	golgi, nucleus, plasma membrane	37.5	13.11
CDY08136	Canola	cytosol	38.97	13.09
CDY08200	Canola	cytosol, golgi, mitochondrion, plasma membrane	41.18	12.67
CDX83262	Canola	cytosol, mitochondrion	36.76	12.56
CDY31173	Canola	cytosol, mitochondrion	36.03	12.31
CDY60959	Canola	cytosol, mitochondrion, plastid	25.0	12.27
CDY15353	Canola	cytosol	45.59	12.04
CDX79453	Canola	plastid	31.62	11.32
CDY19127	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.12	10.43
CDY10678	Canola	cytosol	29.41	10.36
CDY66546	Canola	cytosol	17.65	9.6
CDY19131	Canola	mitochondrion	39.71	9.08
CDY66545	Canola	cytosol, peroxisome, plastid	24.26	8.99
CDY15344	Canola	mitochondrion	22.06	8.67
CDY12260	Canola	cytosol	18.38	7.84
CDY12259	Canola	cytosol	17.65	7.41
CDY26564	Canola	mitochondrion	24.26	7.21
CDY15342	Canola	cytosol	11.03	6.58
CDY71858	Canola	cytosol, mitochondrion, nucleus, plastid	5.88	6.35
CDY15999	Canola	cytosol, mitochondrion	25.74	5.43
CDY65287	Canola	cytosol	2.21	3.09
CDY15358	Canola	cytosol, extracellular, plastid	2.21	2.14
CDY30661	Canola	cytosol	2.94	1.72
CDY00206	Canola	nucleus	2.21	1.66

Protein Annotations

EnsemblPlants:CDY46037	EnsemblPlantsGene:GSBRNA2T00083161001	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	PANTHER:PTHR31790	PANTHER:PTHR31790:SF47
PFAM:PF08268	ProteinID:CDY46037	ProteinID:CDY46037.1	ProteinID:CDY70182.1	SignalP:SignalP-noTM	TIGRFAMs:TIGR01640
UniParc:UPI0004EED8BD	UniProt:A0A078I7I0	MapMan:35.1	:	:	:

Description

BnaC02g17270DBnaAnng32830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7I0]

Coordinates

chrLK032647:+:111365..111775

Molecular Weight (calculated)

15858.0 Da

IEP (calculated)

5.601

GRAVY (calculated)

-0.092

Length

136 amino acids

Sequence
(BLAST)

001: MLLWSLSTLV NYKGTLGALL SDGYAEVTGE TKCFELWVLV DADKHEWSKH ISISLPPLWK NIVTEDRLYF VGVTGTDEIV LSPRYLSEPY SFYVYYYNNE
101: SNTIRRIEIQ GMDAFRHCKI RLSLNHVEDV KLLQYI

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.