Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52272 | Canola | cytosol | 3.3 | 77.27 |
| CDY15326 | Canola | cytosol | 15.73 | 63.28 |
| CDY18160 | Canola | cytosol | 19.22 | 55.62 |
| CDY15327 | Canola | cytosol | 39.42 | 52.73 |
| CDY15357 | Canola | cytosol, nucleus, plastid | 5.44 | 50.91 |
| CDX97874 | Canola | extracellular | 26.41 | 50.75 |
| CDY15336 | Canola | plastid | 37.67 | 49.49 |
| CDY15332 | Canola | cytosol | 36.89 | 48.72 |
| CDY19134 | Canola | mitochondrion | 35.92 | 48.43 |
| CDY15333 | Canola | mitochondrion | 35.73 | 47.92 |
| CDY15324 | Canola | cytosol | 35.53 | 47.78 |
| CDY15352 | Canola | mitochondrion | 37.09 | 47.28 |
| CDY15359 | Canola | cytosol, plastid | 36.5 | 47.24 |
| CDY60955 | Canola | cytosol, extracellular, plastid, vacuole | 27.77 | 46.58 |
| CDY60961 | Canola | cytosol | 35.53 | 46.1 |
| CDY46037 | Canola | extracellular | 12.04 | 45.59 |
| CDY70182 | Canola | extracellular | 12.04 | 45.59 |
| CDY19137 | Canola | cytosol, mitochondrion, plastid | 35.73 | 45.32 |
| CDX97551 | Canola | mitochondrion | 34.37 | 45.15 |
| CDY19132 | Canola | mitochondrion | 34.37 | 45.04 |
| CDY51358 | Canola | cytosol | 32.04 | 43.65 |
| CDY52273 | Canola | cytosol, plastid | 25.05 | 43.29 |
| CDY67625 | Canola | mitochondrion | 19.81 | 39.69 |
| CDY65288 | Canola | mitochondrion | 21.16 | 39.49 |
| CDY70684 | Canola | cytosol | 14.95 | 37.56 |
| CDY42092 | Canola | cytosol | 10.1 | 36.88 |
| CDY60959 | Canola | cytosol, mitochondrion, plastid | 19.42 | 36.1 |
| AT3G23960.1 | Thale cress | cytosol | 27.77 | 35.57 |
| CDX79454 | Canola | cytosol | 20.39 | 34.88 |
| CDY12626 | Canola | cytosol | 25.05 | 34.49 |
| CDX98860 | Canola | cytosol | 26.8 | 34.16 |
| CDY12239 | Canola | mitochondrion | 18.45 | 34.05 |
| CDY67859 | Canola | cytosol, mitochondrion | 24.85 | 33.86 |
| CDY42089 | Canola | cytosol | 26.41 | 33.33 |
| CDX70134 | Canola | cytosol | 25.44 | 33.25 |
| CDY19088 | Canola | cytosol | 26.02 | 33.09 |
| CDY72470 | Canola | golgi, nucleus, plasma membrane | 24.85 | 32.9 |
| CDY12627 | Canola | cytosol | 25.24 | 32.66 |
| CDY30662 | Canola | extracellular, mitochondrion | 8.74 | 32.61 |
| CDY67066 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 25.05 | 31.85 |
| CDY42091 | Canola | mitochondrion | 19.03 | 31.72 |
| CDY29942 | Canola | cytosol | 18.06 | 31.31 |
| CDY72410 | Canola | cytosol | 21.94 | 30.46 |
| CDY15344 | Canola | mitochondrion | 20.39 | 30.35 |
| CDY29771 | Canola | cytosol, plastid | 19.42 | 30.03 |
| CDY66545 | Canola | cytosol, peroxisome, plastid | 21.36 | 29.97 |
| CDY05937 | Canola | cytosol | 19.61 | 29.88 |
| CDY19131 | Canola | mitochondrion | 34.17 | 29.58 |
| CDY08137 | Canola | cytosol | 23.3 | 29.41 |
| CDY31173 | Canola | cytosol, mitochondrion | 22.52 | 29.15 |
| CDY42088 | Canola | cytosol | 22.91 | 28.85 |
| CDY29772 | Canola | cytosol | 22.72 | 28.68 |
| CDY08136 | Canola | cytosol | 22.52 | 28.64 |
| CDX83262 | Canola | cytosol, mitochondrion | 21.94 | 28.39 |
| CDY66546 | Canola | cytosol | 13.2 | 27.2 |
| CDX79453 | Canola | plastid | 20.0 | 27.11 |
| CDY10678 | Canola | cytosol | 18.64 | 24.87 |
| CDY08200 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 21.16 | 24.66 |
| CDY00206 | Canola | nucleus | 8.16 | 23.2 |
| CDY30661 | Canola | cytosol | 9.9 | 21.98 |
| CDY15358 | Canola | cytosol, extracellular, plastid | 5.83 | 21.43 |
| CDY19127 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 23.3 | 20.87 |
| CDY26564 | Canola | mitochondrion | 15.92 | 17.9 |
| CDY12259 | Canola | cytosol | 11.26 | 17.9 |
| CDY12260 | Canola | cytosol | 11.07 | 17.87 |
| CDY71858 | Canola | cytosol, mitochondrion, nucleus, plastid | 3.88 | 15.87 |
| CDY65287 | Canola | cytosol | 2.91 | 15.46 |
| CDY15999 | Canola | cytosol, mitochondrion | 17.67 | 14.13 |
| CDY15342 | Canola | cytosol | 5.83 | 13.16 |
Protein Annotations
| Gene3D:3.20.20.100 | MapMan:35.1 | GO:A0A078FSS1 | UniProt:A0A078FSS1 | InterPro:Aldo/ket_reductase_CS | InterPro:Aldo/keto_reductase |
| EnsemblPlants:CDY15353 | ProteinID:CDY15353 | ProteinID:CDY15353.1 | ncoils:Coil | InterPro:F-box-assoc_dom_typ3 | InterPro:F-box-assoc_interact_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00085640001 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR036812 | InterPro:NADP_OxRdtase_dom | InterPro:NADP_OxRdtase_dom_sf | PFAM:PF00248 |
| PFAM:PF08268 | PRINTS:PR00069 | ScanProsite:PS00062 | PANTHER:PTHR31790 | PANTHER:PTHR31790:SF10 | SUPFAM:SSF50965 |
| SUPFAM:SSF51430 | TIGRFAMs:TIGR01640 | UniParc:UPI0004EF4A99 | SEG:seg | : | : |
Description
BnaC04g42700DBnaC04g42700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSS1]
Coordinates
chrLK032054:-:239233..242333
Molecular Weight (calculated)
59091.8 Da
IEP (calculated)
5.712
GRAVY (calculated)
-0.232
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRLQRFVDE NDNLISLVKK LPEKLHHNIM ESFSIHSTDR TSKQTVDVLR RRDKTLQSQI HSLKAEIDDF QTEASFFANT ASEAALDVEE SELDVVNGLG
101: DKTNDNRIGY EESVLEKPQY LKKYRCTELS PERVCPALQN TLQELQLDYL DLYLIHWPFR LREGASKPPK AGDVLEFDME GVWREMEKLV KDNLVRSIGV
201: CNFTITKLNK LLAFADLIPY VCQVLYQSLN QSSSCSTYTL IMLETNTHGK MQVSNMMLNC DSDEMIWNPS TGQSLTLPRL NSRLRVGVDS YLGYDPVAKQ
301: LKVLSMNRSV ASGELFSVEH QVLTLGTKNL SWRLVECCVP HFSCRKWICI GGVLYYTASV NSSSFSSMVV CFDLRSEKFR FVNFMETFSR AMDESTTLVN
401: YDGRLVLLMS EDSSNVTRSS KSFDLWVLQD DEWSKHVYVL PPSWKDVVTE IMCISGMVGT SEIVLSPRFQ YVPSYVMYYN VESKTIRKVG IQGLEAFQGS
501: RFYTYLNYVE NVKFL
101: DKTNDNRIGY EESVLEKPQY LKKYRCTELS PERVCPALQN TLQELQLDYL DLYLIHWPFR LREGASKPPK AGDVLEFDME GVWREMEKLV KDNLVRSIGV
201: CNFTITKLNK LLAFADLIPY VCQVLYQSLN QSSSCSTYTL IMLETNTHGK MQVSNMMLNC DSDEMIWNPS TGQSLTLPRL NSRLRVGVDS YLGYDPVAKQ
301: LKVLSMNRSV ASGELFSVEH QVLTLGTKNL SWRLVECCVP HFSCRKWICI GGVLYYTASV NSSSFSSMVV CFDLRSEKFR FVNFMETFSR AMDESTTLVN
401: YDGRLVLLMS EDSSNVTRSS KSFDLWVLQD DEWSKHVYVL PPSWKDVVTE IMCISGMVGT SEIVLSPRFQ YVPSYVMYYN VESKTIRKVG IQGLEAFQGS
501: RFYTYLNYVE NVKFL
001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI
Arabidopsis Description
DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.