CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	96.98	96.98
CDY46037	Canola	extracellular	31.91	93.38
CDY70182	Canola	extracellular	31.91	93.38
CDY12626	Canola	cytosol	68.34	72.73
CDY67859	Canola	cytosol, mitochondrion	67.09	70.63
CDY15357	Canola	cytosol, nucleus, plastid	6.53	47.27
CDY15326	Canola	cytosol	14.32	44.53
CDY67625	Canola	mitochondrion	28.39	43.97
CDY18160	Canola	cytosol	19.6	43.82
CDY42088	Canola	cytosol	44.47	43.28
CDX79454	Canola	cytosol	32.41	42.86
CDX70134	Canola	cytosol	41.71	42.13
CDY29771	Canola	cytosol, plastid	35.18	42.04
CDX79453	Canola	plastid	39.95	41.84
CDY67066	Canola	cytosol, mitochondrion, nucleus, peroxisome	42.46	41.73
CDY19088	Canola	cytosol	42.46	41.73
CDY15332	Canola	cytosol	40.45	41.28
CDY65287	Canola	cytosol	10.05	41.24
CDY15344	Canola	mitochondrion	35.68	41.04
CDY15327	Canola	cytosol	39.7	41.04
CDY15359	Canola	cytosol, plastid	40.95	40.95
CDY19134	Canola	mitochondrion	39.2	40.84
CDY60961	Canola	cytosol	40.7	40.81
CDY12239	Canola	mitochondrion	28.39	40.5
CDY52273	Canola	cytosol, plastid	30.15	40.27
CDY15352	Canola	mitochondrion	40.7	40.1
CDX98860	Canola	cytosol	40.7	40.1
CDY60955	Canola	cytosol, extracellular, plastid, vacuole	30.9	40.07
CDY66546	Canola	cytosol	25.13	40.0
CDY42089	Canola	cytosol	40.95	39.95
CDY72470	Canola	golgi, nucleus, plasma membrane	38.69	39.59
CDY15333	Canola	mitochondrion	38.19	39.58
CDY19132	Canola	mitochondrion	38.94	39.44
CDX97551	Canola	mitochondrion	38.69	39.29
CDY15336	Canola	plastid	38.69	39.29
CDY15324	Canola	cytosol	37.69	39.16
CDY30662	Canola	extracellular, mitochondrion	13.57	39.13
AT3G61340.2	Thale cress	cytosol	42.71	39.08
CDY42092	Canola	cytosol	13.82	39.01
CDY42091	Canola	mitochondrion	30.15	38.84
CDY19137	Canola	cytosol, mitochondrion, plastid	39.45	38.67
CDY65288	Canola	mitochondrion	26.63	38.41
CDY70684	Canola	cytosol	19.6	38.05
CDY72410	Canola	cytosol	35.43	38.01
CDY08137	Canola	cytosol	38.94	37.99
CDY29772	Canola	cytosol	38.94	37.99
CDY60959	Canola	cytosol, mitochondrion, plastid	26.38	37.91
CDY51358	Canola	cytosol	35.68	37.57
CDY05937	Canola	cytosol	31.66	37.28
CDY10678	Canola	cytosol	35.68	36.79
CDY31173	Canola	cytosol, mitochondrion	36.68	36.68
CDY66545	Canola	cytosol, peroxisome, plastid	33.67	36.51
CDX83262	Canola	cytosol, mitochondrion	36.43	36.43
CDY08136	Canola	cytosol	36.18	35.56
CDY00206	Canola	nucleus	15.83	34.81
CDX97874	Canola	extracellular	23.12	34.33
CDY15358	Canola	cytosol, extracellular, plastid	11.81	33.57
CDY71858	Canola	cytosol, mitochondrion, nucleus, plastid	10.55	33.33
CDY29942	Canola	cytosol	24.62	33.0
CDY30661	Canola	cytosol	18.84	32.33
CDY08200	Canola	cytosol, golgi, mitochondrion, plasma membrane	35.43	31.9
CDY52272	Canola	cytosol	1.76	31.82
CDY19127	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	41.96	29.04
CDY12260	Canola	cytosol	22.86	28.53
CDY12259	Canola	cytosol	23.12	28.4
CDY15353	Canola	cytosol	32.66	25.24
CDY19131	Canola	mitochondrion	37.19	24.87
CDY26564	Canola	mitochondrion	22.61	19.65
CDY15999	Canola	cytosol, mitochondrion	25.88	15.99
CDY15342	Canola	cytosol	7.04	12.28

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	UniProt:A0A078FI51	EnsemblPlants:CDY12627	ProteinID:CDY12627	ProteinID:CDY12627.1
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00070132001	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF00646
PFAM:PF08268	PANTHER:PTHR31790	PANTHER:PTHR31790:SF10	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383
TIGRFAMs:TIGR01640	UniParc:UPI0004EECFE3	:	:	:	:

Description

BnaA02g12950DBnaA02g12950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI51]

Coordinates

chrLK032025:+:327332..328528

Molecular Weight (calculated)

45620.7 Da

IEP (calculated)

9.555

GRAVY (calculated)

-0.113

Length

398 amino acids

Sequence
(BLAST)

001: MKTRRQHAAE DALTKSRRKT QSPVSVGISE TIPFDLIIEI LLRLPLKSIA RCRSISKSWA SILRREDFTE LFITRSRARP QILISCVENN ESLLFSIPQV
101: QKPGVIAANY IMRLPCTHYS KNIGSLRGLV CFTHIGKNHK TEPVICNPST RQFLTLPHVK TKNVIVASFL GFDPIDKQFK ILSTTTHRNC EEYQVMTLGT
201: KKKMSWRMIK CCISHSYVQH DGICVNGVIY YLAGVSRPPR AISIICFDVR SEKFKVINKA KEMLLWSLST LVNYKGTLGA LLSEGYAEVT GETKCFELWV
301: LVDADKHEWS KHISISPPPL WKNIVTEDSL YFVGVTGTDE IVLSPRYLSE PYSFYVYYYN IESNTIRRVE IQGMDSFRHC KIRLSLNHVE DVKLLQYI

Best Arabidopsis Sequence Match ( AT3G61340.2 )
(BLAST)

001: MIIIRFNQTE GRKKVIRVLR EAASTMMTRR KKRSCSNQKK EEEKSERIPF DLVIEILLRL PVKSIARFRY VSKLWQSTLR GQHFTESYLT ISSSRPKILF
101: TCLKDCETFF FSSPHPQDLS PIAANLHMSF PISCPSNICR PVRGWLCGLH QRTTKGTTVT EPLICNPSTG ESVVLRKVKT RRKGVISFLG FDPIDKNFKV
201: LCMTRSCIGR ADSEEHQVHT LETGKKPSRK MIECDILHYP VPVEHTNGFS QYDGVCINGV LYYLAIVHGV SDDRYPDVVC FEFGSDKFKY IKKVAGHDME
301: ILYLGRRLNS ILVNYKGKLA KLQPNMPNNV CTGIQLWVLE DAEKHEWSSH IYVLPPPWRN VYEETKLCFV GTTRKGEIVL SPNTISDFFY LLYYNPDRNT
401: ITIVKIKGME TFQSHKAYTF LDHLEDVNLV PIWRM

Arabidopsis Description

F-box and associated interaction domains-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.