Factsheet for Bra034015.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12627	Canola	cytosol	96.98	96.98
Bra034016.1-P	Field mustard	cytosol	74.12	73.38
Bra022876.1-P	Field mustard	cytosol	20.1	51.61
Bra021782.1-P	Field mustard	plastid	41.71	43.01
Bra021784.1-P	Field mustard	plastid	41.96	42.93
Bra022877.1-P	Field mustard	cytosol	41.71	42.35
Bra021730.1-P	Field mustard	cytosol	42.71	41.98
Bra009129.1-P	Field mustard	cytosol	41.46	41.56
Bra021767.1-P	Field mustard	cytosol	41.46	41.56
Bra021785.1-P	Field mustard	mitochondrion	39.45	41.1
Bra036901.1-P	Field mustard	cytosol	43.22	40.95
Bra005628.1-P	Field mustard	cytosol	41.96	40.93
Bra021769.1-P	Field mustard	cytosol	40.7	40.0
Bra021772.1-P	Field mustard	plastid	39.2	40.0
Bra021783.1-P	Field mustard	mitochondrion	39.2	39.9
Bra027364.1-P	Field mustard	mitochondrion	39.2	39.8
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	39.7	39.6
AT3G61340.2	Thale cress	cytosol	42.71	39.08
Bra017982.1-P	Field mustard	cytosol	39.45	38.48
Bra036902.1-P	Field mustard	cytosol	39.45	38.39
Bra039989.1-P	Field mustard	cytosol	38.69	38.21
Bra005629.1-P	Field mustard	cytosol	36.18	37.8
Bra023809.1-P	Field mustard	mitochondrion	30.65	37.2
Bra005631.1-P	Field mustard	cytosol	13.32	37.06
Bra017983.1-P	Field mustard	cytosol	36.93	36.3
Bra033908.1-P	Field mustard	cytosol	35.18	36.27
Bra033850.1-P	Field mustard	cytosol	25.38	36.07
Bra021786.1-P	Field mustard	mitochondrion	32.91	35.5
Bra019597.1-P	Field mustard	nucleus	15.58	34.25
Bra021789.1-P	Field mustard	cytosol	40.95	31.96
Bra021780.1-P	Field mustard	mitochondrion	36.68	24.54
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.18	24.22
Bra023245.1-P	Field mustard	cytosol	24.12	19.88
Bra021777.1-P	Field mustard	cytosol	40.2	17.49

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EnsemblPlantsGene:Bra034015	EnsemblPlants:Bra034015.1	EnsemblPlants:Bra034015.1-P	InterPro:F-box-assoc_dom_typ3
InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	UniProt:M4EYX3	PFAM:PF00646	PFAM:PF08268
PANTHER:PTHR31790	PANTHER:PTHR31790:SF10	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniParc:UPI0002545D31	:	:	:	:	:

Description

AT2G31470 (E=3e-084) | F-box family protein

Coordinates

chrA02:+:10192422..10193618

Molecular Weight (calculated)

45411.5 Da

IEP (calculated)

8.992

GRAVY (calculated)

-0.043

Length

398 amino acids

Sequence
(BLAST)

001: MKTRQQHAAE DALTIPRRKT QSPVSVGISE TIPFDLIIEI LLRLPLKSIA RCRSISKSWA SILRREDFTE LFITRSRARP QILISCVENN ESLLFSIPQV
101: QKPGVIAANY IMRLPCTHYS KNIGSLRGLV CFTHIGKNHK TEPVICNPST RQFLTLPHVK TKSVIVASFL GFDPIDKQFK ILSITTHRNC EECQVMTLGT
201: KKKMSWRMME CCISHSYVQN DGICVNGVIY YVAGVSGPPR AISIICFDVR SEKFKVINKA KEMLLWSLST LVNYKGTLGA LLSEGYAEVT GETKCFELWV
301: LVDADKHEWS KHISISLPPL WKNIVTEDSL YFVGVTGTDE IVLSPRYLSE PYSFYVYYYN IESNTIRRVE IQGMDSFRHC KIRLSLNHVE DVKLLQYI

Best Arabidopsis Sequence Match ( AT3G61340.2 )
(BLAST)

001: MIIIRFNQTE GRKKVIRVLR EAASTMMTRR KKRSCSNQKK EEEKSERIPF DLVIEILLRL PVKSIARFRY VSKLWQSTLR GQHFTESYLT ISSSRPKILF
101: TCLKDCETFF FSSPHPQDLS PIAANLHMSF PISCPSNICR PVRGWLCGLH QRTTKGTTVT EPLICNPSTG ESVVLRKVKT RRKGVISFLG FDPIDKNFKV
201: LCMTRSCIGR ADSEEHQVHT LETGKKPSRK MIECDILHYP VPVEHTNGFS QYDGVCINGV LYYLAIVHGV SDDRYPDVVC FEFGSDKFKY IKKVAGHDME
301: ILYLGRRLNS ILVNYKGKLA KLQPNMPNNV CTGIQLWVLE DAEKHEWSSH IYVLPPPWRN VYEETKLCFV GTTRKGEIVL SPNTISDFFY LLYYNPDRNT
401: ITIVKIKGME TFQSHKAYTF LDHLEDVNLV PIWRM

Arabidopsis Description

F-box and associated interaction domains-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.