Factsheet for Bra021769.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60959	Canola	cytosol, mitochondrion, plastid	65.19	95.31
Bra021786.1-P	Field mustard	mitochondrion	67.16	73.71
Bra021789.1-P	Field mustard	cytosol	85.93	68.24
Bra021767.1-P	Field mustard	cytosol	63.21	64.48
Bra021772.1-P	Field mustard	plastid	61.73	64.1
Bra021785.1-P	Field mustard	mitochondrion	59.26	62.83
Bra027364.1-P	Field mustard	mitochondrion	60.74	62.76
Bra023809.1-P	Field mustard	mitochondrion	49.88	61.59
Bra039989.1-P	Field mustard	cytosol	61.23	61.54
Bra021784.1-P	Field mustard	plastid	58.52	60.93
Bra021782.1-P	Field mustard	plastid	58.02	60.88
Bra021783.1-P	Field mustard	mitochondrion	58.77	60.87
Bra021780.1-P	Field mustard	mitochondrion	71.36	48.57
AT3G23960.1	Thale cress	cytosol	45.93	46.27
Bra005628.1-P	Field mustard	cytosol	43.46	43.14
Bra034016.1-P	Field mustard	cytosol	40.99	41.29
Bra022877.1-P	Field mustard	cytosol	39.75	41.07
Bra021730.1-P	Field mustard	cytosol	40.99	40.99
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	40.0	40.7
Bra005629.1-P	Field mustard	cytosol	38.27	40.68
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	39.75	40.35
Bra005631.1-P	Field mustard	cytosol	13.83	39.16
Bra009129.1-P	Field mustard	cytosol	37.53	38.29
Bra022876.1-P	Field mustard	cytosol	14.57	38.06
Bra036901.1-P	Field mustard	cytosol	38.77	37.38
Bra036902.1-P	Field mustard	cytosol	37.04	36.67
Bra033850.1-P	Field mustard	cytosol	24.69	35.71
Bra017982.1-P	Field mustard	cytosol	35.56	35.29
Bra019597.1-P	Field mustard	nucleus	14.81	33.15
Bra017983.1-P	Field mustard	cytosol	32.35	32.35
Bra033908.1-P	Field mustard	cytosol	30.62	32.12
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	32.59	22.84
Bra021777.1-P	Field mustard	cytosol	43.7	19.34
Bra023245.1-P	Field mustard	cytosol	22.72	19.05

Protein Annotations

EnsemblPlants:Bra021769.1	EnsemblPlants:Bra021769.1-P	EnsemblPlantsGene:Bra021769	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR31790
PANTHER:PTHR31790:SF47	PFAM:PF00646	PFAM:PF08268	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002544F0E
UniProt:M4DZ22	MapMan:35.1	:	:	:	:

Description

AT2G31470 (E=2e-090) | F-box family protein

Coordinates

chrA04:+:14362704..14363921

Molecular Weight (calculated)

46066.6 Da

IEP (calculated)

8.362

GRAVY (calculated)

-0.160

Length

405 amino acids

Sequence
(BLAST)

001: MQPPRQNVSK GGELTNYRGV TRSMTRRHRN SLPVPDELAM EIFSRLPSKA MAMCRCACKL WSSMLRRQDF TELFLTESCA RPQLLFFRED HSVREFVFIS
101: SPQPENPQEN SYVVASNPLA CFPRSSGFYG CTNGFFCYGA DRFFKRLKFP VCVPVICNPS TGQSLTMPRL ISKKRYGVQS YLGYEPIEKE LKLLSMNNSL
201: VSDEWISVEH QVLTLGTKKL SWRLVECCVP HCPSTKWICI SGVLYYAASA DGSSENSMVL CFDLRSEEFS SVKFGKAMPD STTTMVNYNG KLGLLMSGDS
301: HYVTRSSTSF ELWVLLDAAK QEWSNHVYVL PPSWEDVVAE TMCIAGMVGT NEIVFSPIYQ RVPYYVIYFN VERRTITKVG IQGLEAFQGK SFKTYLNYVE
401: NVKLL

Best Arabidopsis Sequence Match ( AT1G53790.1 )
(BLAST)

001: MVRDIVDDPL DEDDIALVKT YGLVPYSAPI KKVEKEIKEL TEKINDLCGI KESDTGLAPL SKQMMQEGQP LQVGYVSCFR YIPIDLLMDI FSRVPAKSIA
101: RFRCVSKLWE SILCRPDFKE LFMTMSSIRP PLLLFTFQDD DGNLFFFSSP HPQIPCNENT SLVPTRYHVQ HTTDSFSEIG SPLCGFICRR GKRNLDTMVI
201: CNPVTGESVS LPKVELKSIN TETRPYLGYD PVRKQLKVLC IKSDDIPNTC DEHQVLTLEN GNHLWRTIQC KPHYPKSDGI CIDGILYYTA GFDMRARVSM
301: VVCFDVRSEK FSFINIHVFM LMNDSCTLIN YKGKLGALQF TCLSPKRLRF WVLVNAEKNI WTKCIYALPP LWNNLVQHTE LAIVGMTDGG EVVLSQYCLI
401: YAFYIYYFNL ESKSLTRVQI QDVEMFKRTR VYTSLGYVEN FKLM

Arabidopsis Description

F-box and associated interaction domains-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.