Factsheet for Bra036901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29771	Canola	cytosol, plastid	76.67	96.7
Bra036902.1-P	Field mustard	cytosol	56.43	57.95
AT2G19630.1	Thale cress	cytosol, nucleus, plasma membrane	30.95	43.77
Bra034016.1-P	Field mustard	cytosol	41.43	43.28
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	40.95	43.22
Bra021730.1-P	Field mustard	cytosol	41.43	42.96
Bra022877.1-P	Field mustard	cytosol	39.76	42.6
Bra005628.1-P	Field mustard	cytosol	41.19	42.4
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	40.24	42.36
Bra009129.1-P	Field mustard	cytosol	39.76	42.07
Bra021772.1-P	Field mustard	plastid	37.86	40.77
Bra021785.1-P	Field mustard	mitochondrion	36.9	40.58
Bra005629.1-P	Field mustard	cytosol	36.19	39.9
Bra021767.1-P	Field mustard	cytosol	37.38	39.55
Bra021783.1-P	Field mustard	mitochondrion	36.67	39.39
Bra021782.1-P	Field mustard	plastid	36.19	39.38
Bra022876.1-P	Field mustard	cytosol	14.52	39.35
Bra021784.1-P	Field mustard	plastid	36.43	39.33
Bra027364.1-P	Field mustard	mitochondrion	36.43	39.03
Bra021769.1-P	Field mustard	cytosol	37.38	38.77
Bra023809.1-P	Field mustard	mitochondrion	29.76	38.11
Bra033908.1-P	Field mustard	cytosol	35.0	38.08
Bra005631.1-P	Field mustard	cytosol	12.86	37.76
Bra039989.1-P	Field mustard	cytosol	35.48	36.97
Bra017982.1-P	Field mustard	cytosol	35.48	36.52
Bra033850.1-P	Field mustard	cytosol	23.57	35.36
Bra017983.1-P	Field mustard	cytosol	33.81	35.06
Bra021786.1-P	Field mustard	mitochondrion	30.71	34.96
Bra019597.1-P	Field mustard	nucleus	14.76	34.25
Bra021789.1-P	Field mustard	cytosol	38.33	31.57
Bra021780.1-P	Field mustard	mitochondrion	36.67	25.88
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.05	24.74
Bra021777.1-P	Field mustard	cytosol	47.38	21.75
Bra023245.1-P	Field mustard	cytosol	21.9	19.05

Protein Annotations

EnsemblPlants:Bra036901.1	EnsemblPlants:Bra036901.1-P	EnsemblPlantsGene:Bra036901	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810
PANTHER:PTHR31790	PANTHER:PTHR31790:SF10	PFAM:PF00646	PFAM:PF08268	SEG:seg	SMART:SM00256
SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002545009	UniProt:M4F741	MapMan:35.1	:

Description

AT2G31470 (E=7e-081) | F-box family protein

Coordinates

chrA01:-:12190214..12191476

Molecular Weight (calculated)

48356.2 Da

IEP (calculated)

8.313

GRAVY (calculated)

-0.241

Length

420 amino acids

Sequence
(BLAST)

001: MNTQHRNNVS DDCQSINLRH HNTRSSKPSD HGRESSSALP IPTDLIIDIF SRLPLKSIAI CRCVSKTWAS TLRRQDFTDF YLRKSSTRPQ ILLAPVKNRE
101: LFFFSSPQPQ YLQENLPSVV ANCHMKLSFG GFGEIRCGRP VHGLACLRQL RVSEGERETV LFICNPSTRQ VLHLPKVKTS RPVVKSMFGY DPIDKQFKVL
201: CMPRFNDGRD YHEHQVLTLG APDRSWRMLE CCIPHYGDPP KEICINGVLY YKSINKSTET YLIVCFDVRS EMFSFIEVKV TLQRALLRGA LRNCNGKLGL
301: FISEDNGYFR SSVSERSTSV QLWVLEDVEK QEWSDHIYLL PALWKNLVGR DCLFFAGVTL TNEIVLAPSF SSYPFYLYYL NTKRNTVVAR LVEIQGIDVS
401: DYYMDHVVLD HVEDVKLYDV

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.