Factsheet for Bra009129.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000874.1-P
Bra036257.1-P
Bra039504.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31470.1	Bra039504.1-P	AT2G03170.1	18835996
AT2G31470.1	Bra000874.1-P	AT4G02570.1	18835996
AT2G31470.1	Bra036257.1-P	AT4G02570.1	18835996

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70134	Canola	cytosol	96.47	97.21
AT2G31470.1	Thale cress	cytosol	47.61	48.84
Bra021730.1-P	Field mustard	cytosol	47.86	46.91
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	46.1	45.86
Bra034016.1-P	Field mustard	cytosol	44.58	44.03
Bra022876.1-P	Field mustard	cytosol	17.13	43.87
Bra021772.1-P	Field mustard	plastid	42.32	43.08
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	41.56	41.46
Bra005628.1-P	Field mustard	cytosol	41.81	40.69
Bra019597.1-P	Field mustard	nucleus	18.39	40.33
Bra036901.1-P	Field mustard	cytosol	42.07	39.76
Bra005629.1-P	Field mustard	cytosol	38.04	39.63
Bra021767.1-P	Field mustard	cytosol	39.55	39.55
Bra021782.1-P	Field mustard	plastid	38.29	39.38
Bra021785.1-P	Field mustard	mitochondrion	37.78	39.27
Bra005631.1-P	Field mustard	cytosol	14.11	39.16
Bra021784.1-P	Field mustard	plastid	38.29	39.07
Bra022877.1-P	Field mustard	cytosol	38.54	39.03
Bra033850.1-P	Field mustard	cytosol	27.2	38.57
Bra021783.1-P	Field mustard	mitochondrion	37.78	38.36
Bra036902.1-P	Field mustard	cytosol	38.79	37.65
Bra021769.1-P	Field mustard	cytosol	38.29	37.53
Bra027364.1-P	Field mustard	mitochondrion	37.03	37.5
Bra033908.1-P	Field mustard	cytosol	35.26	36.27
Bra017982.1-P	Field mustard	cytosol	36.78	35.78
Bra017983.1-P	Field mustard	cytosol	36.27	35.56
Bra039989.1-P	Field mustard	cytosol	36.02	35.48
Bra021786.1-P	Field mustard	mitochondrion	31.74	34.15
Bra023809.1-P	Field mustard	mitochondrion	27.96	33.84
Bra021789.1-P	Field mustard	cytosol	39.55	30.78
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.03	25.43
Bra021780.1-P	Field mustard	mitochondrion	37.03	24.71
Bra023245.1-P	Field mustard	cytosol	22.17	18.22
Bra021777.1-P	Field mustard	cytosol	38.79	16.83

Protein Annotations

EnsemblPlants:Bra009129.1	EnsemblPlants:Bra009129.1-P	EnsemblPlantsGene:Bra009129	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR31790
PANTHER:PTHR31790:SF47	PFAM:PF08268	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002544C51
UniProt:M4CY32	MapMan:35.1	:	:	:	:

Description

AT2G31470 (E=1e-096) | F-box family protein

Coordinates

chrA10:+:15353841..15355034

Molecular Weight (calculated)

46200.5 Da

IEP (calculated)

8.709

GRAVY (calculated)

-0.235

Length

397 amino acids

Sequence
(BLAST)

001: MRTRRQKILE DRQAVVERLN AGENSLQIPV DLIFEILLRL SVKSIARGRC LSKFWASILE RQDFTDHYLT RSSARPQLLF AFQDRCKVFF FSAPQDDNSF
101: LITASYHMSF PVNRVKEIYS PISGLVCVRE GMKTPVTVWV ICNPSTGQYF TLPRMKTRNN KCDVRSFFGY DPVENQFKVL SMTTLAHGKR DLAIYKEHQV
201: LTLQTGKLPW RMIECNVPHH HGINCICING VLYYKAKNGA DSSTYGKDII VTFDVRSEKF GFIEVDKPFI PVHTLINFNA KLASVESYSF NRRSPIHLWV
301: LDDIEKNEWS KHVYKLPASW EEVVGDADLY CVKVTASNEV VLSGYYQRSP FYVFYYSLEK ETVRRVEIQE MEAFKHFQVY TFVDHVEDVK VYFRTGS

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.