Factsheet for Bra036902.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29772	Canola	cytosol	96.33	96.57
Bra036901.1-P	Field mustard	cytosol	57.95	56.43
AT2G19630.1	Thale cress	cytosol, nucleus, plasma membrane	31.54	43.43
Bra022876.1-P	Field mustard	cytosol	15.89	41.94
Bra034016.1-P	Field mustard	cytosol	40.34	41.04
Bra005628.1-P	Field mustard	cytosol	40.83	40.93
Bra022877.1-P	Field mustard	cytosol	38.63	40.31
Bra021772.1-P	Field mustard	plastid	37.9	39.74
Bra021785.1-P	Field mustard	mitochondrion	36.92	39.53
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	38.39	39.45
Bra021730.1-P	Field mustard	cytosol	38.63	39.01
Bra021783.1-P	Field mustard	mitochondrion	37.16	38.87
Bra021784.1-P	Field mustard	plastid	36.92	38.82
Bra021767.1-P	Field mustard	cytosol	37.65	38.79
Bra009129.1-P	Field mustard	cytosol	37.65	38.79
Bra021782.1-P	Field mustard	plastid	36.43	38.6
Bra005629.1-P	Field mustard	cytosol	35.94	38.58
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	36.67	37.59
Bra039989.1-P	Field mustard	cytosol	36.67	37.22
Bra021769.1-P	Field mustard	cytosol	36.67	37.04
Bra023809.1-P	Field mustard	mitochondrion	28.85	35.98
Bra027364.1-P	Field mustard	mitochondrion	34.47	35.97
Bra017982.1-P	Field mustard	cytosol	35.45	35.54
Bra019597.1-P	Field mustard	nucleus	15.65	35.36
Bra017983.1-P	Field mustard	cytosol	34.96	35.31
Bra021786.1-P	Field mustard	mitochondrion	31.78	35.23
Bra033908.1-P	Field mustard	cytosol	33.01	34.97
Bra005631.1-P	Field mustard	cytosol	12.22	34.97
Bra033850.1-P	Field mustard	cytosol	22.25	32.5
Bra021789.1-P	Field mustard	cytosol	36.19	29.02
Bra021780.1-P	Field mustard	mitochondrion	35.7	24.54
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.5	23.7
Bra021777.1-P	Field mustard	cytosol	44.99	20.11
Bra023245.1-P	Field mustard	cytosol	22.49	19.05

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra036902	EnsemblPlants:Bra036902.1	EnsemblPlants:Bra036902.1-P	InterPro:F-box-assoc_dom_typ3
InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M4F742	PFAM:PF00646	PFAM:PF08268
PANTHER:PTHR31790	PANTHER:PTHR31790:SF47	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0002545008

Description

AT2G31470 (E=8e-080) | F-box family protein

Coordinates

chrA01:-:12184285..12185514

Molecular Weight (calculated)

46317.8 Da

IEP (calculated)

7.246

GRAVY (calculated)

-0.134

Length

409 amino acids

Sequence
(BLAST)

001: METQQTLNVS WDSQRNTLPK TSDNGRESSS ASPIPTDVIV DIFSRLPLKS IAMCRCVSKL WASVLRLPHF TELFLTKSSS CPPQLLHARV TNSELFLFSS
101: SASPHPDENS SPPPVVATRH MKLSFGGFGE ISCGRPVYGL VFVKHVRVLD GETETSLAIC NPSTRQVLHL PKVEMKRLKV RSMFGYDPVD KQYKVLCMTT
201: DGGHHQVLTL GGSWRMLECC IPHYDYPLLK EICIDGVLYY KSINQSTQTY LIVCFDVRSE KFRPIEAKGS LGRAVLTGDM VNYGGRLGLI ICEDNRGNVG
301: AINRRSSRFK LWVLEDVEKQ EWSERVFVLP AEWKNVVGEH RLNFVGVASR TNEIVLSSWY PINCFYLFYF DPEIDTVVRV EMQGVDMDVP NYAVLQTFLD
401: HVEDVKLYA

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.