Factsheet for Bra022876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79453	Canola	plastid	74.19	30.26
Bra005631.1-P	Field mustard	cytosol	23.87	25.87
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	51.61	20.1
Bra034016.1-P	Field mustard	cytosol	50.32	19.4
Bra033850.1-P	Field mustard	cytosol	34.84	19.29
Bra009129.1-P	Field mustard	cytosol	43.87	17.13
Bra021772.1-P	Field mustard	plastid	41.94	16.67
Bra021783.1-P	Field mustard	mitochondrion	41.29	16.37
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	41.94	16.29
Bra005628.1-P	Field mustard	cytosol	42.58	16.18
Bra021785.1-P	Field mustard	mitochondrion	39.35	15.97
Bra036902.1-P	Field mustard	cytosol	41.94	15.89
Bra017982.1-P	Field mustard	cytosol	41.29	15.69
Bra021730.1-P	Field mustard	cytosol	40.65	15.56
Bra017983.1-P	Field mustard	cytosol	40.65	15.56
Bra021782.1-P	Field mustard	plastid	37.42	15.03
Bra021784.1-P	Field mustard	plastid	37.42	14.91
Bra021767.1-P	Field mustard	cytosol	38.06	14.86
Bra005629.1-P	Field mustard	cytosol	36.13	14.7
Bra021769.1-P	Field mustard	cytosol	38.06	14.57
Bra036901.1-P	Field mustard	cytosol	39.35	14.52
Bra039989.1-P	Field mustard	cytosol	36.13	13.9
Bra027364.1-P	Field mustard	mitochondrion	33.55	13.27
Bra023809.1-P	Field mustard	mitochondrion	26.45	12.5
Bra022877.1-P	Field mustard	cytosol	31.61	12.5
Bra021789.1-P	Field mustard	cytosol	40.0	12.16
Bra033908.1-P	Field mustard	cytosol	29.68	11.92
Bra021786.1-P	Field mustard	mitochondrion	23.87	10.03
Bra021780.1-P	Field mustard	mitochondrion	34.84	9.08
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	32.9	8.82
Bra021777.1-P	Field mustard	cytosol	38.06	6.45
Bra023245.1-P	Field mustard	cytosol	8.39	2.69
Bra019597.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Bra022876.1	EnsemblPlants:Bra022876.1-P	EnsemblPlantsGene:Bra022876	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	PANTHER:PTHR31790
PANTHER:PTHR31790:SF47	PFAM:PF08268	TIGRFAMs:TIGR01640	UniParc:UPI000254038D	UniProt:M4E276	MapMan:35.1

Description

AT2G31470 (E=3e-020) | F-box family protein

Coordinates

chrA03:+:7531067..7531626

Molecular Weight (calculated)

17730.1 Da

IEP (calculated)

5.628

GRAVY (calculated)

-0.218

Length

155 amino acids

Sequence
(BLAST)

001: MIECSIPHHP TYDGICIDGC LYYQAIVDRG SGVSAIICFD VRSEKFSFIR KAQGAALWRE STLVDYKGRL GTLTADRDEL TGETGEAQLY YIGMSANNEV
101: LLSPRYPSSP FYVFYYNFER GTIRRVEIQN MDALKYGRIH TFLDHVEDVK LYTNV

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.