Factsheet for Bra021772.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 2
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60955	Canola	cytosol, extracellular, plastid, vacuole	76.41	97.07
Bra021769.1-P	Field mustard	cytosol	64.1	61.73
Bra021767.1-P	Field mustard	cytosol	61.03	59.95
Bra021785.1-P	Field mustard	mitochondrion	58.21	59.42
Bra021782.1-P	Field mustard	plastid	58.21	58.81
Bra021784.1-P	Field mustard	plastid	58.46	58.61
Bra021783.1-P	Field mustard	mitochondrion	58.21	58.06
Bra027364.1-P	Field mustard	mitochondrion	57.95	57.65
Bra023809.1-P	Field mustard	mitochondrion	48.46	57.62
Bra039989.1-P	Field mustard	cytosol	56.41	54.59
Bra021786.1-P	Field mustard	mitochondrion	49.74	52.57
Bra021789.1-P	Field mustard	cytosol	62.56	47.84
AT3G23960.1	Thale cress	cytosol	45.9	44.53
Bra022877.1-P	Field mustard	cytosol	44.62	44.39
Bra021730.1-P	Field mustard	cytosol	44.87	43.21
Bra009129.1-P	Field mustard	cytosol	43.08	42.32
Bra005629.1-P	Field mustard	cytosol	41.28	42.26
Bra022876.1-P	Field mustard	cytosol	16.67	41.94
Bra005628.1-P	Field mustard	cytosol	43.33	41.42
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	41.79	40.85
Bra034016.1-P	Field mustard	cytosol	41.79	40.55
Bra019597.1-P	Field mustard	nucleus	18.46	39.78
Bra021780.1-P	Field mustard	mitochondrion	60.26	39.5
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	40.0	39.2
Bra033850.1-P	Field mustard	cytosol	27.95	38.93
Bra017982.1-P	Field mustard	cytosol	39.74	37.99
Bra036902.1-P	Field mustard	cytosol	39.74	37.9
Bra036901.1-P	Field mustard	cytosol	40.77	37.86
Bra005631.1-P	Field mustard	cytosol	13.85	37.76
Bra017983.1-P	Field mustard	cytosol	36.41	35.06
Bra033908.1-P	Field mustard	cytosol	34.1	34.46
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.13	23.7
Bra023245.1-P	Field mustard	cytosol	23.85	19.25
Bra021777.1-P	Field mustard	cytosol	43.85	18.69

Protein Annotations

EnsemblPlants:Bra021772.1	EnsemblPlants:Bra021772.1-P	EnsemblPlantsGene:Bra021772	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR31790
PANTHER:PTHR31790:SF47	PFAM:PF00646	PFAM:PF08268	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640
UniParc:UPI0002544F11	UniProt:M4DZ25	MapMan:35.1	:	:	:

Description

AT2G31470 (E=5e-101) | F-box family protein

Coordinates

chrA04:+:14369148..14370320

Molecular Weight (calculated)

43830.9 Da

IEP (calculated)

6.396

GRAVY (calculated)

0.034

Length

390 amino acids

Sequence
(BLAST)

001: MNVSVLTISP PVMGSSLPIP DDLVFEIFSR LPSKAIARCR CVSKLLASML RSHYFTELFL TKSCARPQLL FAFEDDSEVV FFSSPQPENP EENSYVLAAN
101: QLARIPSSYG LSAPTSGFFC YKVEQTFEGM KVPEFVPVIC NPSTGQSLTL PRLKPTMRQG AHSHLGYDPV SKEFKVLSME TSFVSGEWIS LKHQVLTLGT
201: EKLSWRLVEC SIPHCPSTKW ICINGVLYYT ATAGYWSSMV VCFDFKSEKF SFVNFMEASG KEMHGSTTLI NYNGKLGLLM SEDTGYDYIC GASKSLELWV
301: LRDAGKNEWS EHVYVLPPSW EDVVSAMSIS GMVGTNEIVL APLFRNVPPY VIYYNVERKT ITKVGIQVME ALQGKRFYTF LNYVEDVKFL

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.