Factsheet for Bra005631.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42092	Canola	cytosol	91.61	92.91
Bra022876.1-P	Field mustard	cytosol	25.87	23.87
Bra005629.1-P	Field mustard	cytosol	51.05	19.16
Bra022877.1-P	Field mustard	cytosol	47.55	17.35
Bra023809.1-P	Field mustard	mitochondrion	36.36	15.85
Bra033850.1-P	Field mustard	cytosol	30.07	15.36
Bra009129.1-P	Field mustard	cytosol	39.16	14.11
Bra027364.1-P	Field mustard	mitochondrion	38.46	14.03
Bra021782.1-P	Field mustard	plastid	37.76	13.99
Bra021784.1-P	Field mustard	plastid	37.76	13.88
Bra021767.1-P	Field mustard	cytosol	38.46	13.85
Bra021772.1-P	Field mustard	plastid	37.76	13.85
Bra021769.1-P	Field mustard	cytosol	39.16	13.83
Bra039989.1-P	Field mustard	cytosol	38.46	13.65
Bra021785.1-P	Field mustard	mitochondrion	36.36	13.61
Bra005628.1-P	Field mustard	cytosol	38.46	13.48
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	37.06	13.32
Bra021783.1-P	Field mustard	mitochondrion	36.36	13.3
Bra034016.1-P	Field mustard	cytosol	36.36	12.94
Bra036901.1-P	Field mustard	cytosol	37.76	12.86
Bra021730.1-P	Field mustard	cytosol	36.36	12.84
Bra036902.1-P	Field mustard	cytosol	34.97	12.22
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	31.47	11.28
Bra017983.1-P	Field mustard	cytosol	31.47	11.11
Bra017982.1-P	Field mustard	cytosol	31.47	11.03
Bra021789.1-P	Field mustard	cytosol	37.06	10.39
Bra021780.1-P	Field mustard	mitochondrion	39.16	9.41
Bra033908.1-P	Field mustard	cytosol	20.28	7.51
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	27.97	6.92
Bra021786.1-P	Field mustard	mitochondrion	15.38	5.96
Bra021777.1-P	Field mustard	cytosol	37.76	5.9
Bra023245.1-P	Field mustard	cytosol	9.09	2.69
Bra019597.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Bra005631.1	EnsemblPlants:Bra005631.1-P	EnsemblPlantsGene:Bra005631	InterPro:F-box-assoc_dom_typ3	PANTHER:PTHR31790	PANTHER:PTHR31790:SF47
PFAM:PF08268	UniParc:UPI00025477E3	UniProt:M4CN43	MapMan:35.1	:	:

Description

AT5G65850 (E=2e-024) | F-box family protein

Coordinates

chrA05:+:6641423..6641854

Molecular Weight (calculated)

16395.8 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.105

Length

143 amino acids

Sequence
(BLAST)

001: MSEKFSCIEL DTTFKEAVFN QSMINYNGKL GSVKINRFKL GGTHSIELMS IGDSENQEWS KHTYILPPVL KNVVGKEVLR FAGVTDSNEI VFGHPSCVIY
101: YNIEKYTIVK VRIQGMEAFQ STNLSTFLDH KVFDYIRKVQ LFL

Best Arabidopsis Sequence Match ( AT5G65850.1 )
(BLAST)

001: MRTLRRNVTE NRLTISRRRT EKKTSPNKTE KSVQIPVDII IEILLRLPAK SIATCRCVSK LWISVICRQD FTELFLTRSL HRPQLLFCCK KDGNLFFFSS
101: PQLQNPYENS SAISLKNFSL CYKISRPVNG LICFKRKEMN ETVTVICNPS TGHTLSLPKP MKTSIGPSRF FVYEPIQKQF KVLLSYKSDE HQVLTLGTGE
201: LSWRIIECSM PHILGMSEIC INGVLYYPAI NLSSGDYIIV CFDVRSEKFR FITVMEEFIK AAHDGTLINY NGKLASLVSE RYCFVDGRSK SIELWVLQDA
301: EKKEWSKHTY VLPAWWQHRI GTLNLRFVGV TRTNEIMLSP CYQTVPFDVY YFNIERKTMM SVAIQGMEAF QGHLVFTYLD HVENVKLLHN MF

Arabidopsis Description

F-box protein At5g65850 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHP3]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.