Factsheet for Bra033850.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70684	Canola	cytosol	68.93	94.15
CDY29942	Canola	cytosol	78.57	74.07
Bra033908.1-P	Field mustard	cytosol	53.93	39.12
AT1G46912.1	Thale cress	plasma membrane	42.86	38.46
Bra022876.1-P	Field mustard	cytosol	19.29	34.84
AT1G46984.1	Thale cress	mitochondrion	45.71	34.59
Bra000514.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.0	33.91
Bra005631.1-P	Field mustard	cytosol	15.36	30.07
Bra021772.1-P	Field mustard	plastid	38.93	27.95
Bra021730.1-P	Field mustard	cytosol	40.0	27.65
Bra034016.1-P	Field mustard	cytosol	39.29	27.36
Bra009129.1-P	Field mustard	cytosol	38.57	27.2
Bra027364.1-P	Field mustard	mitochondrion	37.14	26.53
Bra021702.1-P	Field mustard	cytosol, peroxisome, plastid	37.5	26.32
Bra005629.1-P	Field mustard	cytosol	35.71	26.25
Bra021767.1-P	Field mustard	cytosol	36.43	25.69
AT1G46840.1	Thale cress	cytosol	43.57	25.68
Bra005628.1-P	Field mustard	cytosol	37.14	25.49
Bra017982.1-P	Field mustard	cytosol	37.14	25.49
Bra034015.1-P	Field mustard	cytosol, nucleus, peroxisome	36.07	25.38
Bra017983.1-P	Field mustard	cytosol	36.43	25.19
Bra021785.1-P	Field mustard	mitochondrion	34.29	25.13
Bra021783.1-P	Field mustard	mitochondrion	35.0	25.06
Bra021769.1-P	Field mustard	cytosol	35.71	24.69
Bra039989.1-P	Field mustard	cytosol	35.0	24.32
Bra021784.1-P	Field mustard	plastid	33.57	24.16
Bra021782.1-P	Field mustard	plastid	33.21	24.09
Bra036901.1-P	Field mustard	cytosol	35.36	23.57
Bra022877.1-P	Field mustard	cytosol	32.14	22.96
Bra036902.1-P	Field mustard	cytosol	32.5	22.25
Bra021786.1-P	Field mustard	mitochondrion	28.57	21.68
Bra023809.1-P	Field mustard	mitochondrion	25.36	21.65
Bra021789.1-P	Field mustard	cytosol	35.0	19.22
Bra021780.1-P	Field mustard	mitochondrion	34.64	16.3
Bra019597.1-P	Field mustard	nucleus	9.64	14.92
Bra023245.1-P	Field mustard	cytosol	24.29	14.08
Bra021777.1-P	Field mustard	cytosol	37.14	11.37

Protein Annotations

EnsemblPlants:Bra033850.1	EnsemblPlants:Bra033850.1-P	EnsemblPlantsGene:Bra033850	InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	PANTHER:PTHR31790
PANTHER:PTHR31790:SF10	PFAM:PF08268	TIGRFAMs:TIGR01640	UniParc:UPI0002548132	UniProt:M4EYF8	MapMan:35.1

Description

AT1G46984 (E=9e-071) | F-box protein-related

Coordinates

chrA05:+:14442400..14443242

Molecular Weight (calculated)

32902.7 Da

IEP (calculated)

9.202

GRAVY (calculated)

-0.302

Length

280 amino acids

Sequence
(BLAST)

001: MGFSGDWYKE TCQSANGFIY LYDKQMFKGK IERVPVLCNP STGQQVHLPI VRAKNNDLRS FLGYDPIENE FKVLCMTVAK YNKQTNSREH KVLTLGKGKP
101: SWRKIKCLFP HFPENYKNGI CINGILYYIA RSNLNTVIAC FNVKYEKFRF IQIGEESSML TFLTWINYNG KLAALVFDQS RHDQLWVLDD PENEKWSKHI
201: FHLPTAAFMV IRSIWATDSG EIVWAPSRWT YPLYVFYYNL ERQSVRRVEI KGIEEKALMG HYRPEAIFTF TNHVENVMFL

Best Arabidopsis Sequence Match ( AT1G46984.1 )
(BLAST)

001: MNRRKNDFLV RPKRIRCYTQ LSTLPIDLII EILSRLPMNS IAICRLVSKQ WASILQSSDF TESFLIKSPP RPRLLFTIRY GSKWHLFSAP QPRNFDENFP
101: VVATDYHKGF SGNWCMQSFQ LVNGFIYLNN RLSLKGKIDR VSVIWNPSTG QQIPLPDLGV KNSHSKSFFG YDPIEKQFKV LCITSSKEHQ VLTLGTGRKL
201: SWRKIEYSYP HYPRKKSNGI CINGVLYYRN TNAMIVRFDV RSEEFRFVEI KMYVEILSLI NYKGKLGVLF PNTDLAQLWV LDDTNKVEWS KHNFVFPDTT
301: FEAIRATDTG EMFCASSCWR DSLYVSYYDL EKESVKKVKI KGIEDKLSIG KHHANEFFIF PNHVENVMVL

Arabidopsis Description

Putative F-box protein At1g46984 [Source:UniProtKB/Swiss-Prot;Acc:Q9C627]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.