Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011501.1-P | Field mustard | nucleus | 96.26 | 96.51 |
| CDX75405 | Canola | nucleus | 95.72 | 95.98 |
| CDX76265 | Canola | nucleus | 84.22 | 86.3 |
| CDY57741 | Canola | nucleus | 84.22 | 86.3 |
| AT4G34160.1 | Thale cress | nucleus | 85.03 | 84.57 |
| CDY49278 | Canola | nucleus | 83.16 | 84.28 |
| CDX72453 | Canola | nucleus | 80.75 | 83.89 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 46.79 | 56.63 |
| PGSC0003DMT400066557 | Potato | nucleus | 51.07 | 53.35 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 54.55 | 52.85 |
| Solyc01g107730.2.1 | Tomato | nucleus | 50.53 | 51.92 |
| KRG90996 | Soybean | nucleus | 54.01 | 51.4 |
| KRH35760 | Soybean | nucleus | 53.21 | 49.5 |
| CDY01425 | Canola | nucleus | 44.38 | 46.89 |
| CDY02095 | Canola | nucleus | 40.91 | 46.65 |
| CDY12825 | Canola | nucleus | 44.12 | 46.09 |
| CDY23022 | Canola | nucleus | 40.11 | 45.59 |
| CDX68573 | Canola | nucleus | 42.78 | 45.45 |
| CDY30607 | Canola | nucleus | 42.78 | 45.33 |
| CDX83112 | Canola | nucleus | 42.25 | 44.89 |
| CDY17742 | Canola | nucleus | 42.25 | 44.51 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 19.52 | 42.44 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.49 | 33.25 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 29.41 | 31.88 |
| CDY11608 | Canola | nucleus | 27.01 | 31.86 |
| CDY13755 | Canola | nucleus | 24.6 | 31.51 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 30.48 | 31.49 |
| CDY38800 | Canola | nucleus | 26.74 | 31.35 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.41 | 31.07 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.14 | 31.05 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.69 | 30.96 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.14 | 30.79 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.14 | 30.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.94 | 30.6 |
| CDX81286 | Canola | nucleus | 21.66 | 30.45 |
| CDY67142 | Canola | nucleus | 27.54 | 30.38 |
| CDY54717 | Canola | nucleus | 21.39 | 30.08 |
| Os09t0111100-01 | Rice | cytosol | 28.61 | 29.4 |
| CDY59943 | Canola | nucleus | 28.07 | 29.09 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 31.28 | 28.75 |
| CDY08795 | Canola | nucleus | 23.53 | 28.57 |
| CDY14561 | Canola | cytosol | 24.33 | 28.0 |
| CDY37828 | Canola | nucleus | 22.99 | 27.83 |
| CDX76917 | Canola | nucleus | 26.2 | 27.68 |
| CDX89480 | Canola | nucleus | 26.2 | 27.61 |
| CDY33959 | Canola | nucleus | 22.46 | 27.54 |
| CDY25602 | Canola | nucleus | 25.94 | 27.25 |
| EER96424 | Sorghum | cytosol | 27.54 | 26.96 |
| Zm00001d019696_P001 | Maize | cytosol | 27.81 | 26.87 |
| CDY29570 | Canola | nucleus | 23.8 | 26.65 |
| Zm00001d005293_P001 | Maize | cytosol | 27.81 | 26.6 |
| CDX72643 | Canola | nucleus | 23.26 | 25.59 |
| CDX97009 | Canola | nucleus | 19.79 | 25.26 |
| CDX69832 | Canola | nucleus | 20.05 | 25.25 |
| CDY22116 | Canola | nucleus | 18.45 | 23.15 |
| CDY21951 | Canola | nucleus | 18.18 | 22.52 |
| CDX90892 | Canola | nucleus | 8.82 | 21.71 |
| CDY55121 | Canola | cytosol | 18.72 | 20.41 |
| CDY40332 | Canola | cytosol | 18.45 | 20.29 |
| CDY10467 | Canola | cytosol | 18.18 | 20.06 |
| CDX80803 | Canola | cytosol | 18.18 | 15.08 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078JQ44 | UniProt:A0A078JQ44 | EnsemblPlants:CDY69708 | ProteinID:CDY69708 |
| ProteinID:CDY69708.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00091803001 | PFAM:PF00134 | PFAM:PF02984 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF351 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EC52CA | SEG:seg | : | : | : | : |
Description
BnaCnng64910DBnaCnng64910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ44]
Coordinates
chrLK040130:+:269..1640
Molecular Weight (calculated)
42594.8 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.244
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIPTEEESR EEHNTSFLLD ALYCEEEKWE DDDEEEVEAV EENSSFSSAS TSSPLAILQQ DLFWEDEDLV TLFSKEEEQG LSCVDDVYLA TDRKEAVGWI
101: LRVNSRYGFS TLAAVLAITY LDKFICSYSL QRDKPWMLQL VSVACLSLAA KVEETHVPLL LDFQVEETKY VFEAKTIQRM ELLILSTLQW KMHLVTPLSF
201: LDHIIRRLGL KNNAHWDFLN SCHRLILSVI SDSRFVGYLP SVVAAATMMR IIEQVEPFDP LSYQTKLLGV LNITKEKVKS CYDLILELPM GRMGLQIETQ
301: TRRKRKSGES PCCVIDSNPF NSDESSNDSW SASSCNPPSS PQQQPPLKKM RGDQETQKEK PVLHLPWAII VASP
101: LRVNSRYGFS TLAAVLAITY LDKFICSYSL QRDKPWMLQL VSVACLSLAA KVEETHVPLL LDFQVEETKY VFEAKTIQRM ELLILSTLQW KMHLVTPLSF
201: LDHIIRRLGL KNNAHWDFLN SCHRLILSVI SDSRFVGYLP SVVAAATMMR IIEQVEPFDP LSYQTKLLGV LNITKEKVKS CYDLILELPM GRMGLQIETQ
301: TRRKRKSGES PCCVIDSNPF NSDESSNDSW SASSCNPPSS PQQQPPLKKM RGDQETQKEK PVLHLPWAII VASP
001: MAIRKEEESR EEQSNSFLLD ALYCEEEKWD DEGEEVEENS SLSSSSSPFV VLQQDLFWED EDLVTLFSKE EEQGLSCLDD VYLSTDRKEA VGWILRVNAH
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
Arabidopsis Description
CYCD3-1Cyclin-D3-1 [Source:UniProtKB/Swiss-Prot;Acc:P42753]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.