Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08795 | Canola | nucleus | 88.62 | 93.51 |
| AT5G65420.3 | Thale cress | nucleus | 80.92 | 82.7 |
| CDY54717 | Canola | nucleus | 65.23 | 79.7 |
| CDX81286 | Canola | nucleus | 65.23 | 79.7 |
| CDY33959 | Canola | nucleus | 71.08 | 75.74 |
| CDY37828 | Canola | nucleus | 71.38 | 75.08 |
| CDX69832 | Canola | nucleus | 56.31 | 61.62 |
| CDX97009 | Canola | nucleus | 54.77 | 60.75 |
| CDY13755 | Canola | nucleus | 39.38 | 43.84 |
| Solyc11g010460.1.1 | Tomato | cytosol | 41.85 | 43.59 |
| PGSC0003DMT400037827 | Potato | nucleus | 45.54 | 43.02 |
| KRH69654 | Soybean | cytosol | 32.0 | 42.8 |
| Solyc05g051410.2.1 | Tomato | nucleus | 44.92 | 42.44 |
| KRH45568 | Soybean | nucleus | 44.0 | 41.33 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 31.38 | 40.96 |
| GSMUA_Achr10P... | Banana | nucleus | 40.0 | 40.5 |
| KRH74510 | Soybean | nucleus | 44.92 | 40.44 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 43.69 | 40.23 |
| CDY25602 | Canola | nucleus | 44.0 | 40.17 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 42.77 | 40.06 |
| KRG99448 | Soybean | nucleus | 44.0 | 39.94 |
| CDX89480 | Canola | nucleus | 43.38 | 39.72 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 42.77 | 39.71 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 41.85 | 39.31 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 41.85 | 38.97 |
| CDX76917 | Canola | nucleus | 42.15 | 38.7 |
| GSMUA_Achr10P... | Banana | nucleus | 40.92 | 38.66 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 40.62 | 38.04 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 42.15 | 37.95 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 41.54 | 37.71 |
| PGSC0003DMT400041637 | Potato | nucleus | 45.23 | 37.31 |
| TraesCS6B01G345300.1 | Wheat | plastid | 40.31 | 37.11 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 39.69 | 36.75 |
| Zm00001d018128_P001 | Maize | nucleus | 39.69 | 36.34 |
| Zm00001d052185_P001 | Maize | nucleus | 40.0 | 36.11 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 39.69 | 36.03 |
| EES07560 | Sorghum | nucleus | 38.15 | 34.64 |
| KXG19603 | Sorghum | nucleus | 34.77 | 32.47 |
| CDY11608 | Canola | nucleus | 31.08 | 31.86 |
| CDY38800 | Canola | nucleus | 30.15 | 30.72 |
| CDY67142 | Canola | nucleus | 31.38 | 30.09 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 23.08 | 29.76 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 15.69 | 29.65 |
| CDY59943 | Canola | nucleus | 30.46 | 27.42 |
| CDX83112 | Canola | nucleus | 29.23 | 26.99 |
| CDX68573 | Canola | nucleus | 28.92 | 26.7 |
| CDY30607 | Canola | nucleus | 28.92 | 26.63 |
| CDY02095 | Canola | nucleus | 26.77 | 26.52 |
| CDY17742 | Canola | nucleus | 28.92 | 26.48 |
| CDY23022 | Canola | nucleus | 26.15 | 25.84 |
| CDX76265 | Canola | nucleus | 28.31 | 25.21 |
| CDY57741 | Canola | nucleus | 28.0 | 24.93 |
| CDY01425 | Canola | nucleus | 27.08 | 24.86 |
| CDY12825 | Canola | nucleus | 27.08 | 24.58 |
| CDY22116 | Canola | nucleus | 22.46 | 24.5 |
| CDX72453 | Canola | nucleus | 27.08 | 24.44 |
| CDY49278 | Canola | nucleus | 27.69 | 24.39 |
| CDY69708 | Canola | nucleus | 28.0 | 24.33 |
| CDX75405 | Canola | nucleus | 27.69 | 24.13 |
| CDY21951 | Canola | nucleus | 22.15 | 23.84 |
| CDY29570 | Canola | nucleus | 23.38 | 22.75 |
| CDX72643 | Canola | nucleus | 23.69 | 22.65 |
| CDY10467 | Canola | cytosol | 21.85 | 20.94 |
| CDY40332 | Canola | cytosol | 21.54 | 20.59 |
| CDX90892 | Canola | nucleus | 9.23 | 19.74 |
| CDY55121 | Canola | cytosol | 19.69 | 18.66 |
| CDX80803 | Canola | cytosol | 20.0 | 14.41 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078FNA9 | UniProt:A0A078FNA9 | EnsemblPlants:CDY14561 | ProteinID:CDY14561 |
| ProteinID:CDY14561.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00079303001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EDC65B | SEG:seg | : | : | : | : |
Description
BnaC03g48980DBnaC03g48980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNA9]
Coordinates
chrLK032044:-:684042..686244
Molecular Weight (calculated)
36587.9 Da
IEP (calculated)
4.703
GRAVY (calculated)
-0.087
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANLELSLL CTEITNVGDE DDGIILDETP IVFPEISISQ TSFPSESDEF IREMMEKEKQ LLPSDDYISR LRSGYLDLDV RRREALNWIL KIRGLCRTNS
101: AFDACEEHQF GPMCICLSMN YLDRFLSVHD FPSGNTWAVQ LLAVACLSLA AKVEETEVPM LIDLQAGHPQ FVFEAKSIQR MELLVLNRLE WRLRAITPFS
201: YIRYFLRKMS KCDQEPPNTL ISRSLQVIAS KTKAGIDFLE FRPSEVAAAV ALSVSGELYT VHFDNSSFSP LFSLLQKERV KKIGEMIESD EPGLCSQTPN
301: GVLEVSACCF GSKTHDSSSP HTHLS
101: AFDACEEHQF GPMCICLSMN YLDRFLSVHD FPSGNTWAVQ LLAVACLSLA AKVEETEVPM LIDLQAGHPQ FVFEAKSIQR MELLVLNRLE WRLRAITPFS
201: YIRYFLRKMS KCDQEPPNTL ISRSLQVIAS KTKAGIDFLE FRPSEVAAAV ALSVSGELYT VHFDNSSFSP LFSLLQKERV KKIGEMIESD EPGLCSQTPN
301: GVLEVSACCF GSKTHDSSSP HTHLS
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKIRG LCRTDREACE
101: VHQFGPLCFC LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL
201: RKMSKCDQEP SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA
301: CCFSFKTHDS SSSYTHLS
101: VHQFGPLCFC LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL
201: RKMSKCDQEP SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA
301: CCFSFKTHDS SSSYTHLS
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.