Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30607 | Canola | nucleus | 96.06 | 96.6 |
| Bra036051.1-P | Field mustard | nucleus | 96.06 | 96.6 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 45.07 | 93.02 |
| CDX83112 | Canola | nucleus | 77.75 | 78.41 |
| CDX68573 | Canola | nucleus | 76.34 | 76.99 |
| CDY23022 | Canola | nucleus | 70.99 | 76.6 |
| CDY02095 | Canola | nucleus | 70.42 | 76.22 |
| CDY01425 | Canola | nucleus | 63.1 | 63.28 |
| CDY12825 | Canola | nucleus | 63.66 | 63.13 |
| KRH04529 | Soybean | nucleus | 50.99 | 48.79 |
| KRH57973 | Soybean | nucleus | 50.7 | 47.0 |
| KRH77050 | Soybean | nucleus, plastid | 43.38 | 46.11 |
| KRH28424 | Soybean | nucleus | 43.38 | 45.97 |
| Solyc02g092980.2.1 | Tomato | nucleus | 45.63 | 45.13 |
| PGSC0003DMT400064307 | Potato | nucleus | 45.35 | 44.35 |
| PGSC0003DMT400031329 | Potato | nucleus | 38.87 | 42.86 |
| CDX75405 | Canola | nucleus | 44.51 | 42.36 |
| CDY69708 | Canola | nucleus | 44.51 | 42.25 |
| PGSC0003DMT400068629 | Potato | cytosol | 28.45 | 42.08 |
| CDY49278 | Canola | nucleus | 43.66 | 42.01 |
| CDX72453 | Canola | nucleus | 42.54 | 41.94 |
| CDX76265 | Canola | nucleus | 43.1 | 41.92 |
| CDY57741 | Canola | nucleus | 42.54 | 41.37 |
| Solyc02g064900.1.1 | Tomato | nucleus | 38.31 | 39.31 |
| Solyc02g064860.1.1 | Tomato | nucleus | 25.63 | 38.72 |
| Solyc02g064910.1.1 | Tomato | nucleus | 25.35 | 38.3 |
| PGSC0003DMT400068627 | Potato | nucleus | 32.39 | 37.34 |
| PGSC0003DMT400011487 | Potato | nucleus | 18.59 | 35.87 |
| CDY13755 | Canola | nucleus | 28.17 | 34.25 |
| CDX81286 | Canola | nucleus | 25.35 | 33.83 |
| CDY11608 | Canola | nucleus | 30.14 | 33.75 |
| CDY38800 | Canola | nucleus | 29.86 | 33.23 |
| CDY67142 | Canola | nucleus | 31.27 | 32.74 |
| CDY54717 | Canola | nucleus | 23.66 | 31.58 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 31.83 | 31.22 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.08 | 31.19 |
| CDY59943 | Canola | nucleus | 31.55 | 31.02 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 30.14 | 31.01 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 30.14 | 30.23 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 30.14 | 30.23 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.86 | 30.2 |
| CDX97009 | Canola | nucleus | 24.79 | 30.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.76 | 29.97 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.86 | 29.94 |
| CDX76917 | Canola | nucleus | 29.86 | 29.94 |
| CDX69832 | Canola | nucleus | 24.79 | 29.63 |
| CDY08795 | Canola | nucleus | 25.63 | 29.55 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.52 | 29.24 |
| CDX89480 | Canola | nucleus | 29.01 | 29.01 |
| CDY25602 | Canola | nucleus | 29.01 | 28.93 |
| CDY14561 | Canola | cytosol | 26.48 | 28.92 |
| Os09t0111100-01 | Rice | cytosol | 29.58 | 28.85 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 32.96 | 28.75 |
| CDY37828 | Canola | nucleus | 24.51 | 28.16 |
| CDY33959 | Canola | nucleus | 23.94 | 27.87 |
| EER96424 | Sorghum | cytosol | 29.3 | 27.23 |
| Zm00001d019696_P001 | Maize | cytosol | 29.58 | 27.13 |
| Zm00001d005293_P001 | Maize | cytosol | 29.3 | 26.6 |
| CDY29570 | Canola | nucleus | 22.54 | 23.95 |
| CDX72643 | Canola | nucleus | 22.54 | 23.53 |
| CDY22116 | Canola | nucleus | 19.72 | 23.49 |
| CDY21951 | Canola | nucleus | 19.44 | 22.85 |
| CDY55121 | Canola | cytosol | 21.69 | 22.45 |
| CDY40332 | Canola | cytosol | 21.13 | 22.06 |
| CDY10467 | Canola | cytosol | 20.85 | 21.83 |
| CDX80803 | Canola | cytosol | 22.54 | 17.74 |
| CDX90892 | Canola | nucleus | 7.32 | 17.11 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078FY72 | UniProt:A0A078FY72 | EnsemblPlants:CDY17742 | ProteinID:CDY17742 |
| ProteinID:CDY17742.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00001979001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0001B33FF0 | SEG:seg | : | : | : |
Description
BnaC08g21500DBnaC08g21500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY72]
Coordinates
chrLK032077:-:249101..250587
Molecular Weight (calculated)
41086.6 Da
IEP (calculated)
4.473
GRAVY (calculated)
-0.236
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEEEEEIQ NAPFCMLFCE EDSSGFDEED EDSCDDKSDE KFPFFHLGFL DRCMSWEEDE LSSLISKENE FRPSLTEEGV LDDEYLALCR EKAVDWILRV
101: KSHYGFSSLT ALLAVNYFDR FITSRKFQTE FPWMSQLTAL ACLSLAAKVE EVRVPLLVDL QVEEASYVFE AKTIQRMELL ILSTLHWRVH PVTPISYLDH
201: IIRRFSFKSH QQLEFLSRCE SLLLSIVPDS RFLSYSSSEL AAAIMVSVFR GFKTCDESEY ESQLMTLLRV DSEKVHKCYE LVFDHIPSTK RMQQPPSPTG
301: VFDASFSFDS SNESWVVSAS PSPEPLFKRR RVQEQQMKLS SVNRVFLDVF SSSPR
101: KSHYGFSSLT ALLAVNYFDR FITSRKFQTE FPWMSQLTAL ACLSLAAKVE EVRVPLLVDL QVEEASYVFE AKTIQRMELL ILSTLHWRVH PVTPISYLDH
201: IIRRFSFKSH QQLEFLSRCE SLLLSIVPDS RFLSYSSSEL AAAIMVSVFR GFKTCDESEY ESQLMTLLRV DSEKVHKCYE LVFDHIPSTK RMQQPPSPTG
301: VFDASFSFDS SNESWVVSAS PSPEPLFKRR RVQEQQMKLS SVNRVFLDVF SSSPR
001: MALEEEEESQ NAPFCVLDGL FCEEESEFHE QVDLCDESVE KFPFLNLGLS DHDMLWDDDE LSTLISKQEP CLYDEILDDE FLVLCREKAL DWIFKVKSHY
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
Arabidopsis Description
CYCD3-3CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.