Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57973 | Soybean | nucleus | 89.76 | 86.95 |
| KRH28424 | Soybean | nucleus | 58.22 | 64.48 |
| KRH77050 | Soybean | nucleus, plastid | 57.68 | 64.07 |
| CDY12825 | Canola | nucleus | 52.29 | 54.19 |
| CDY02095 | Canola | nucleus | 47.44 | 53.66 |
| CDY23022 | Canola | nucleus | 47.17 | 53.19 |
| AT3G50070.1 | Thale cress | nucleus | 51.75 | 53.19 |
| Bra012146.1-P | Field mustard | nucleus | 50.67 | 53.11 |
| Bra012909.1-P | Field mustard | nucleus | 46.9 | 53.05 |
| CDY01425 | Canola | nucleus | 50.4 | 52.82 |
| CDY30607 | Canola | nucleus | 49.87 | 52.41 |
| Bra036051.1-P | Field mustard | nucleus | 49.6 | 52.12 |
| CDX83112 | Canola | nucleus | 49.06 | 51.7 |
| Bra029992.1-P | Field mustard | nucleus | 49.06 | 51.7 |
| CDY17742 | Canola | nucleus | 48.79 | 50.99 |
| CDX68573 | Canola | nucleus | 48.25 | 50.85 |
| KRH61348 | Soybean | nucleus | 47.44 | 50.43 |
| Solyc02g092980.2.1 | Tomato | nucleus | 48.52 | 50.14 |
| PGSC0003DMT400064307 | Potato | nucleus | 48.79 | 49.86 |
| PGSC0003DMT400031329 | Potato | nucleus | 42.59 | 49.07 |
| KRH52038 | Soybean | nucleus | 47.71 | 48.9 |
| PGSC0003DMT400068629 | Potato | cytosol | 31.0 | 47.92 |
| KRG90996 | Soybean | nucleus | 50.67 | 47.84 |
| KRH05626 | Soybean | cytosol | 27.22 | 46.98 |
| KRH35760 | Soybean | nucleus | 50.67 | 46.77 |
| AT5G67260.2 | Thale cress | nucleus | 50.13 | 46.04 |
| KRH15412 | Soybean | cytosol | 32.61 | 44.81 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 20.75 | 44.77 |
| PGSC0003DMT400011487 | Potato | nucleus | 21.83 | 44.02 |
| Solyc02g064900.1.1 | Tomato | nucleus | 40.7 | 43.64 |
| PGSC0003DMT400068627 | Potato | nucleus | 34.5 | 41.56 |
| Solyc02g064910.1.1 | Tomato | nucleus | 26.15 | 41.28 |
| Solyc02g064860.1.1 | Tomato | nucleus | 26.15 | 41.28 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 35.58 | 34.02 |
| KRH16827 | Soybean | nucleus | 31.81 | 33.24 |
| KRH62196 | Soybean | nucleus | 31.54 | 33.24 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.3 | 33.12 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 30.73 | 33.04 |
| KRH52917 | Soybean | nucleus | 31.27 | 32.95 |
| KRG99448 | Soybean | nucleus | 31.54 | 32.68 |
| KRH45568 | Soybean | nucleus | 30.46 | 32.66 |
| KRH72435 | Soybean | nucleus | 31.27 | 32.49 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 30.73 | 32.2 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 30.73 | 32.2 |
| KRH58137 | Soybean | nucleus | 27.49 | 32.08 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 35.04 | 31.94 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 30.46 | 31.92 |
| KRH69476 | Soybean | nucleus | 29.11 | 31.86 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 31.0 | 31.77 |
| KRH69654 | Soybean | cytosol | 20.75 | 31.69 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.92 | 31.62 |
| KRH35652 | Soybean | nucleus | 25.34 | 31.13 |
| Zm00001d019696_P001 | Maize | cytosol | 32.08 | 30.75 |
| KRH45743 | Soybean | nucleus | 29.11 | 30.0 |
| KRH04404 | Soybean | vacuole | 27.49 | 30.0 |
| Os09t0111100-01 | Rice | cytosol | 29.38 | 29.95 |
| KRH74510 | Soybean | nucleus | 29.11 | 29.92 |
| KRG99255 | Soybean | nucleus | 28.03 | 29.89 |
| Zm00001d005293_P001 | Maize | cytosol | 31.0 | 29.41 |
| EER96424 | Sorghum | cytosol | 30.19 | 29.32 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 32.08 | 29.24 |
| KRG91131 | Soybean | nucleus | 25.34 | 29.01 |
| KRH61407 | Soybean | nucleus | 23.72 | 28.21 |
| KRH52092 | Soybean | nucleus | 23.45 | 27.71 |
| KRH74675 | Soybean | nucleus, plastid | 27.76 | 26.96 |
| KRH22479 | Soybean | cytosol | 22.91 | 26.9 |
| KRH25470 | Soybean | nucleus | 23.18 | 26.54 |
| KRH21593 | Soybean | nucleus | 19.41 | 26.47 |
| KRH10729 | Soybean | nucleus | 19.41 | 26.47 |
| KRH26876 | Soybean | nucleus | 22.37 | 26.35 |
| KRH54628 | Soybean | cytosol | 10.78 | 26.14 |
| KRH54622 | Soybean | cytosol | 10.78 | 26.14 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 23.18 | 26.14 |
| KRH28363 | Soybean | nucleus | 22.64 | 25.38 |
| KRH77118 | Soybean | nucleus | 22.64 | 25.3 |
| KRH65892 | Soybean | cytosol | 19.41 | 25.0 |
| KRH75669 | Soybean | cytosol | 18.87 | 24.22 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100785030 | MapMan:13.1.1.1.4 | EMBL:ACUP02010439 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_17G167700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1MVT1 | EnsemblPlants:KRH04529 | ProteinID:KRH04529 | ProteinID:KRH04529.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI000233EF2F | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:15479880..15481925
Molecular Weight (calculated)
42259.5 Da
IEP (calculated)
5.076
GRAVY (calculated)
-0.163
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGDDAQHH SPSFLDALLC EERETFEEDF DENGYERETE NNEPSVIKSQ SLPLVLHDND LFWEDEELVS LIAKEGETHL CFHGVVANGA LEGPRVEAVN
101: WISKVCGHYG FSALTTVLAV NYFDRFITSL KFQNDKPWMT QLTAVACLSL AVKTEETHVP LLLDLQVEES RFVFEAKTIQ RMELLVLSTL KWRMHPVTPI
201: SFFEHIVRRL GLKSRLHWEF LWRCERVLLN VIADSRVMSY LPSTLAAATM IRVIKEIESF NATEYIDQLL GLLKISEEQV NQCYKIIQKL LGCYEGIYSL
301: HQKRKRLSEP GSPGAVTDAS FSCDSSNDSW TVSSSVSLSL EPLLKRRKSQ DQQMRLPSVN CVSIDVLNSP R
101: WISKVCGHYG FSALTTVLAV NYFDRFITSL KFQNDKPWMT QLTAVACLSL AVKTEETHVP LLLDLQVEES RFVFEAKTIQ RMELLVLSTL KWRMHPVTPI
201: SFFEHIVRRL GLKSRLHWEF LWRCERVLLN VIADSRVMSY LPSTLAAATM IRVIKEIESF NATEYIDQLL GLLKISEEQV NQCYKIIQKL LGCYEGIYSL
301: HQKRKRLSEP GSPGAVTDAS FSCDSSNDSW TVSSSVSLSL EPLLKRRKSQ DQQMRLPSVN CVSIDVLNSP R
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.