Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75669 | Soybean | cytosol | 88.19 | 87.89 |
| KRH54622 | Soybean | cytosol | 44.44 | 83.66 |
| KRH54628 | Soybean | cytosol | 44.44 | 83.66 |
| VIT_08s0007g00790.t01 | Wine grape | nucleus | 44.1 | 37.57 |
| GSMUA_Achr10P... | Banana | cytosol | 27.78 | 31.62 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 29.51 | 30.91 |
| CDY10467 | Canola | cytosol | 35.76 | 30.38 |
| Bra005708.1-P | Field mustard | cytosol | 36.11 | 30.32 |
| CDY55121 | Canola | cytosol | 36.11 | 30.32 |
| CDY40332 | Canola | cytosol | 35.07 | 29.71 |
| Bra009612.1-P | Field mustard | cytosol | 35.07 | 29.71 |
| AT5G02110.1 | Thale cress | cytosol | 33.33 | 28.15 |
| KRH69654 | Soybean | cytosol | 21.53 | 25.51 |
| TraesCS4B01G140400.1 | Wheat | cytosol, nucleus, plastid | 28.82 | 25.0 |
| KRH05626 | Soybean | cytosol | 18.4 | 24.65 |
| TraesCS4A01G177400.1 | Wheat | cytosol | 28.12 | 24.32 |
| KRH10729 | Soybean | nucleus | 22.92 | 24.26 |
| KRH35652 | Soybean | nucleus | 25.35 | 24.17 |
| Os11t0706801-00 | Rice | nucleus | 26.39 | 23.75 |
| TraesCS4D01G135100.1 | Wheat | cytosol, nucleus, plastid | 27.78 | 23.74 |
| KRH58137 | Soybean | nucleus | 25.69 | 23.27 |
| CDX80803 | Canola | cytosol | 35.42 | 22.62 |
| KRH61348 | Soybean | nucleus | 27.08 | 22.35 |
| OQU84124 | Sorghum | nucleus | 32.99 | 22.25 |
| KRG91131 | Soybean | nucleus | 25.0 | 22.22 |
| KRH21593 | Soybean | nucleus | 20.83 | 22.06 |
| KRH74510 | Soybean | nucleus | 27.43 | 21.88 |
| KRH69476 | Soybean | nucleus | 25.35 | 21.53 |
| KRH04404 | Soybean | vacuole | 25.0 | 21.18 |
| Zm00001d048594_P001 | Maize | cytosol | 30.9 | 20.94 |
| KRH45568 | Soybean | nucleus | 25.0 | 20.81 |
| KRH15412 | Soybean | cytosol | 19.44 | 20.74 |
| KRH72435 | Soybean | nucleus | 25.69 | 20.73 |
| KRH52038 | Soybean | nucleus | 26.04 | 20.72 |
| KRG99255 | Soybean | nucleus | 24.65 | 20.4 |
| KRH28424 | Soybean | nucleus | 23.61 | 20.3 |
| KRH28363 | Soybean | nucleus | 23.26 | 20.24 |
| KRH16827 | Soybean | nucleus | 24.65 | 20.0 |
| KRH45743 | Soybean | nucleus | 25.0 | 20.0 |
| KRG99448 | Soybean | nucleus | 24.31 | 19.55 |
| KRH61407 | Soybean | nucleus | 21.18 | 19.55 |
| KRH52092 | Soybean | nucleus | 21.18 | 19.43 |
| KRH04529 | Soybean | nucleus | 25.0 | 19.41 |
| KRH74675 | Soybean | nucleus, plastid | 25.69 | 19.37 |
| KRH26876 | Soybean | nucleus | 21.18 | 19.37 |
| KRH22479 | Soybean | cytosol | 21.18 | 19.3 |
| KRH77050 | Soybean | nucleus, plastid | 22.22 | 19.16 |
| KRH77118 | Soybean | nucleus | 21.88 | 18.98 |
| KRH52917 | Soybean | nucleus | 22.92 | 18.75 |
| KRH62196 | Soybean | nucleus | 22.92 | 18.75 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 21.18 | 18.54 |
| KRH25470 | Soybean | nucleus | 20.83 | 18.52 |
| KRH57973 | Soybean | nucleus | 23.96 | 18.02 |
| KRG90996 | Soybean | nucleus | 22.92 | 16.79 |
| KRH35760 | Soybean | nucleus | 22.92 | 16.42 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | UniProt:A0A0R0KQ27 | EMBL:ACUP02001725 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_03G069200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | EnsemblPlants:KRH65892 | ProteinID:KRH65892 | ProteinID:KRH65892.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF215 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0006ED9D92 |
Description
hypothetical protein
Coordinates
chr3:-:14476275..14479388
Molecular Weight (calculated)
33612.7 Da
IEP (calculated)
4.830
GRAVY (calculated)
0.118
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLLCDEVW LSKSSNTFEE VSDPVALKSY ENEEFEEAFA VCLEKEVSFL PESDYTKYLH SNNLIFPRCR VIQWFIKCRS RFNISFGTVF LAVNYLDRFV
101: SICQCHDWEY WMLELISIAC LSIAIKFNEM SALSLHEIQV ENLDYSFQSN VILKMELILL KVLGWRLNSV TSFSFVEMLS VGFLEPHLHE KFISRVIDLL
201: IQATLDQKML EFRPSIVGIS ALWCTLDQLF PPKSDTYIAY IMSILNQSQK DDIIKCHKLM ETQTSMRCEN HHCYCPLSPT TVLYIEHA
101: SICQCHDWEY WMLELISIAC LSIAIKFNEM SALSLHEIQV ENLDYSFQSN VILKMELILL KVLGWRLNSV TSFSFVEMLS VGFLEPHLHE KFISRVIDLL
201: IQATLDQKML EFRPSIVGIS ALWCTLDQLF PPKSDTYIAY IMSILNQSQK DDIIKCHKLM ETQTSMRCEN HHCYCPLSPT TVLYIEHA
001: MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I
Arabidopsis Description
CYCD7-1Putative cyclin-D7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.