Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28363 | Soybean | nucleus | 88.25 | 88.52 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 47.59 | 47.88 |
| KRH52092 | Soybean | nucleus | 42.47 | 44.9 |
| KRH61407 | Soybean | nucleus | 40.96 | 43.59 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 32.53 | 38.85 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 36.14 | 37.74 |
| GSMUA_Achr10P... | Banana | nucleus | 32.23 | 37.41 |
| CDY29570 | Canola | nucleus | 35.24 | 35.03 |
| CDX72643 | Canola | nucleus | 35.84 | 35.0 |
| Bra017840.1-P | Field mustard | nucleus | 35.54 | 34.6 |
| AT4G37630.1 | Thale cress | nucleus | 32.53 | 33.44 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 29.82 | 30.94 |
| KRH69476 | Soybean | nucleus | 29.82 | 29.2 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 30.12 | 28.65 |
| Zm00001d041345_P001 | Maize | cytosol | 30.12 | 28.65 |
| KRH35652 | Soybean | nucleus | 25.9 | 28.48 |
| Zm00001d030894_P002 | Maize | nucleus | 29.52 | 28.41 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 29.82 | 28.21 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 29.82 | 28.12 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 29.82 | 28.12 |
| KRG99255 | Soybean | nucleus | 29.22 | 27.87 |
| EES17294 | Sorghum | nucleus | 30.42 | 27.82 |
| KRH58137 | Soybean | nucleus | 26.51 | 27.67 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 27.41 | 27.58 |
| KRH45743 | Soybean | nucleus | 29.82 | 27.5 |
| KRH05626 | Soybean | cytosol | 17.77 | 27.44 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 28.61 | 27.07 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 27.41 | 27.0 |
| KRH45568 | Soybean | nucleus | 28.01 | 26.88 |
| KRG91131 | Soybean | nucleus | 26.2 | 26.85 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 27.11 | 26.79 |
| KRH16827 | Soybean | nucleus | 28.61 | 26.76 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 27.71 | 26.74 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 27.11 | 26.71 |
| Os03t0203800-01 | Rice | nucleus | 27.71 | 26.67 |
| KRH72435 | Soybean | nucleus | 28.61 | 26.61 |
| Os12t0588800-01 | Rice | nucleus | 28.92 | 26.3 |
| Zm00001d033330_P001 | Maize | nucleus | 28.01 | 26.27 |
| EER92677 | Sorghum | nucleus | 27.71 | 25.92 |
| EER91226 | Sorghum | nucleus | 28.61 | 25.68 |
| KRH74675 | Soybean | nucleus, plastid | 29.52 | 25.65 |
| KRH04404 | Soybean | vacuole | 26.2 | 25.59 |
| KRH69654 | Soybean | cytosol | 18.67 | 25.51 |
| KRH52917 | Soybean | nucleus | 26.81 | 25.28 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 28.61 | 25.27 |
| KRH10729 | Soybean | nucleus | 20.48 | 25.0 |
| Zm00001d013728_P001 | Maize | cytosol | 27.41 | 24.93 |
| KRH61348 | Soybean | nucleus | 25.9 | 24.64 |
| KRH21593 | Soybean | nucleus | 20.18 | 24.63 |
| KRG99448 | Soybean | nucleus | 26.51 | 24.58 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 25.6 | 24.08 |
| KRH62196 | Soybean | nucleus | 25.3 | 23.86 |
| KRH52038 | Soybean | nucleus | 25.6 | 23.48 |
| KRH74510 | Soybean | nucleus | 25.0 | 22.99 |
| KRG90996 | Soybean | nucleus | 27.11 | 22.9 |
| KRH75669 | Soybean | cytosol | 19.88 | 22.84 |
| Zm00001d028092_P001 | Maize | cytosol | 18.67 | 22.79 |
| HORVU4Hr1G013700.2 | Barley | plastid | 27.11 | 22.78 |
| KRH22479 | Soybean | cytosol | 21.69 | 22.78 |
| KRH04529 | Soybean | nucleus | 25.3 | 22.64 |
| KRH15412 | Soybean | cytosol | 18.37 | 22.59 |
| KRH26876 | Soybean | nucleus | 21.39 | 22.54 |
| KRH28424 | Soybean | nucleus | 22.29 | 22.09 |
| KRH57973 | Soybean | nucleus | 25.3 | 21.93 |
| KRH35760 | Soybean | nucleus | 26.51 | 21.89 |
| KRH65892 | Soybean | cytosol | 18.98 | 21.88 |
| KRH77050 | Soybean | nucleus, plastid | 21.99 | 21.86 |
| KRH25470 | Soybean | nucleus | 21.08 | 21.6 |
| KRH54622 | Soybean | cytosol | 9.94 | 21.57 |
| KRH54628 | Soybean | cytosol | 9.94 | 21.57 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 21.08 | 21.28 |
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 6.02 | 16.67 |
| Zm00001d003439_P001 | Maize | plastid | 6.02 | 15.75 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100808000 | MapMan:13.1.1.1.4 | EMBL:ACUP02000658 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_01G193400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:K7K4Q5 | EnsemblPlants:KRH77118 | ProteinID:KRH77118 | ProteinID:KRH77118.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF255 | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI00023BDCD1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:52797048..52799621
Molecular Weight (calculated)
37596.6 Da
IEP (calculated)
5.885
GRAVY (calculated)
-0.288
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSGSGTLF SLSSLLCDEE GEARLFKDQD ENPGIFYSLD NSCFVLEDEE EYIEYLFKQE TGFRSQNHHF FTSDDHSNRH WLRSARVDAI DWILNTQAKF
101: GFKVETAYLS VTYFDRFLSK RSIDESKPWA IKLLSVASLS LAAKMEEQNV PVLSEYPMDD YRFENKVIKN MELMILSTLD WKMGSATPFS YLHYFVGKFC
201: PGSKPQIIIT KATEHIVAMV KDVNLMDQRP SLIASAAILA AFDATLTRKA MDLRLSLISS WGNVESGHVF FCYNLIQEKM KSKVKTPCSN LMSAQSSSTC
301: VLENQSDTSS GAKRKLSFED SENCAGQKLH RP
101: GFKVETAYLS VTYFDRFLSK RSIDESKPWA IKLLSVASLS LAAKMEEQNV PVLSEYPMDD YRFENKVIKN MELMILSTLD WKMGSATPFS YLHYFVGKFC
201: PGSKPQIIIT KATEHIVAMV KDVNLMDQRP SLIASAAILA AFDATLTRKA MDLRLSLISS WGNVESGHVF FCYNLIQEKM KSKVKTPCSN LMSAQSSSTC
301: VLENQSDTSS GAKRKLSFED SENCAGQKLH RP
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.