Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 52.76 | 55.83 |
| Zm00001d028092_P001 | Maize | cytosol | 79.53 | 37.13 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 97.64 | 35.13 |
| EER92677 | Sorghum | nucleus | 76.38 | 27.32 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 59.06 | 21.8 |
| Os03t0203800-01 | Rice | nucleus | 55.12 | 20.29 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 55.91 | 20.23 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 50.39 | 19.39 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 25.2 | 10.0 |
| Zm00001d013728_P001 | Maize | cytosol | 25.2 | 8.77 |
| Zm00001d041345_P001 | Maize | cytosol | 22.83 | 8.31 |
| Zm00001d033330_P001 | Maize | nucleus | 20.47 | 7.34 |
| Zm00001d030894_P002 | Maize | nucleus | 19.68 | 7.25 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 15.75 | 7.19 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 17.32 | 6.92 |
| Zm00001d018128_P001 | Maize | nucleus | 17.32 | 6.2 |
| Zm00001d050475_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 14.96 | 6.15 |
| Zm00001d052185_P001 | Maize | nucleus | 17.32 | 6.11 |
| Zm00001d022175_P001 | Maize | nucleus | 18.11 | 6.1 |
| KRH52092 | Soybean | nucleus | 14.96 | 6.05 |
| Zm00001d020353_P001 | Maize | nucleus | 15.75 | 6.04 |
| KRH77118 | Soybean | nucleus | 15.75 | 6.02 |
| VIT_18s0001g09160.t01 | Wine grape | nucleus | 14.96 | 5.99 |
| Zm00001d029407_P001 | Maize | nucleus | 15.75 | 5.78 |
| Zm00001d049334_P001 | Maize | mitochondrion | 12.6 | 5.48 |
| KRH61407 | Soybean | nucleus | 13.39 | 5.45 |
| KRH28363 | Soybean | nucleus | 14.17 | 5.44 |
| Zm00001d044984_P001 | Maize | mitochondrion | 11.81 | 5.43 |
| Zm00001d005928_P002 | Maize | nucleus | 14.96 | 5.26 |
| Zm00001d021745_P001 | Maize | cytosol, nucleus, plastid | 12.6 | 5.21 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 12.6 | 4.85 |
| Zm00001d038580_P001 | Maize | plastid | 12.6 | 4.8 |
| CDY29570 | Canola | nucleus | 12.6 | 4.79 |
| Bra017840.1-P | Field mustard | nucleus | 12.6 | 4.69 |
| Zm00001d019696_P001 | Maize | cytosol | 14.17 | 4.65 |
| AT4G37630.1 | Thale cress | nucleus | 11.81 | 4.64 |
| CDX72643 | Canola | nucleus | 11.81 | 4.41 |
| Zm00001d005293_P001 | Maize | cytosol | 13.39 | 4.35 |
| Zm00001d031837_P001 | Maize | nucleus | 14.17 | 4.25 |
| Zm00001d048594_P001 | Maize | cytosol | 9.45 | 2.82 |
| GSMUA_Achr10P... | Banana | nucleus | 6.3 | 2.8 |
Protein Annotations
| EnsemblPlants:Zm00001d003439_P001 | EnsemblPlants:Zm00001d003439_T001 | EnsemblPlantsGene:Zm00001d003439 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF273 | ProteinID:ONM16969.1 |
| ProteinID:ONM16970.1 | ProteinID:ONM16971.1 | SEG:seg | UniParc:UPI0004DE9838 | UniProt:A0A1D6E996 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2:-:44471631..44475463
Molecular Weight (calculated)
12877.9 Da
IEP (calculated)
9.721
GRAVY (calculated)
-0.345
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVEYQPST IAVASILVAR GRETPAGNLD ALKAILGSSF PQLDTGHVYS CYSAMIREDD KSPTQSTSTS TGVASSGVSV AAHAGGSGSP SLGASVSVGA
101: NNAAGTAPPA TTDNRNKRRQ LRSPQRQ
101: NNAAGTAPPA TTDNRNKRRQ LRSPQRQ
001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
Arabidopsis Description
ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.