Factsheet for Zm00001d038580_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049334_P001	Maize	mitochondrion	80.18	91.44
Zm00001d044984_P001	Maize	mitochondrion	73.27	88.41
Zm00001d029407_P001	Maize	nucleus	53.75	51.73
OQU92473	Sorghum	nucleus	47.45	45.66
Os03t0392000-00	Rice	cytosol, nucleus, plastid	18.92	25.61
Zm00001d022175_P001	Maize	nucleus	28.83	25.46
Zm00001d050475_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	23.12	24.92
Zm00001d005928_P002	Maize	nucleus	24.02	22.16
Zm00001d018128_P001	Maize	nucleus	23.12	21.69
Zm00001d052185_P001	Maize	nucleus	22.82	21.11
Zm00001d031837_P001	Maize	nucleus	24.62	19.34
Zm00001d021745_P001	Maize	cytosol, nucleus, plastid	16.82	18.24
Zm00001d041345_P001	Maize	cytosol	16.22	15.47
Zm00001d013728_P001	Maize	cytosol	16.22	14.79
Zm00001d048143_P003	Maize	nucleus, peroxisome, plastid	15.62	14.73
Zm00001d030894_P002	Maize	nucleus	15.02	14.49
Zm00001d033330_P001	Maize	nucleus	15.02	14.12
Zm00001d005293_P001	Maize	cytosol	16.52	14.07
Zm00001d019696_P001	Maize	cytosol	16.22	13.95
Zm00001d020353_P001	Maize	nucleus	12.91	12.99
Zm00001d003439_P001	Maize	plastid	4.8	12.6
Zm00001d048594_P001	Maize	cytosol	13.21	10.35
Zm00001d028092_P001	Maize	cytosol	6.61	8.09

Protein Annotations

EnsemblPlants:Zm00001d038580_P001	EnsemblPlants:Zm00001d038580_T001	EnsemblPlantsGene:Zm00001d038580	Gene3D:1.10.472.10	InterPro:Cyclin-like_sf	InterPro:Cyclin_N
PANTHER:PTHR10177	PANTHER:PTHR10177:SF207	PFAM:PF00134	ProteinID:AQK86960.1	SEG:seg	SUPFAM:SSF47954
UniParc:UPI00022091E3	UniProt:A0A1D6M7C3	MapMan:13.1.1.1.4	:	:	:

Description

Cyclin-D2-1

Coordinates

chr6:-:160409660..160411281

Molecular Weight (calculated)

37059.4 Da

IEP (calculated)

9.592

GRAVY (calculated)

0.039

Length

333 amino acids

Sequence
(BLAST)

001: MPAAMRSWIP RDILLHHAMA APDVLRVAPA RLAMRKPAST DAATLSSHPL TLRRLARLLT LLARPPRPCG SLLPISRRGL HISRSLSLLP ATCSADLVRE
101: QPWMPQLMYV ACLTIAAKME ETVVLRRLDI HQNQVPSEKY SFDLDAIQRM EIYVLDSLNW RMQVVTPFYY INYFVDKFTG GKPLSCGFIS RRTEIVLGSL
201: EATKLLQFRP FEMAAVVLSA AAESQENVRI CHEALQEVGL VKKKTDYTAS PSRVLDASCF SFKTDDNQTA GSALTVLFAS DICTVFVMRL IFNRDAQFGL
301: FDGDGKLAKA LDARPLTKVV KDLEAKMKGG QSS

Best Arabidopsis Sequence Match ( AT2G22490.2 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.