Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91226 | Sorghum | nucleus | 81.37 | 80.27 |
| Zm00001d033330_P001 | Maize | nucleus | 74.52 | 76.84 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 58.9 | 63.99 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 58.63 | 63.5 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 58.36 | 63.2 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 60.55 | 58.78 |
| Zm00001d030894_P002 | Maize | nucleus | 50.68 | 53.62 |
| Zm00001d041345_P001 | Maize | cytosol | 50.68 | 53.01 |
| HORVU4Hr1G013700.2 | Barley | plastid | 56.99 | 52.66 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 35.62 | 40.62 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 26.3 | 34.53 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 32.05 | 33.14 |
| KRH61407 | Soybean | nucleus | 27.95 | 32.69 |
| GSMUA_Achr10P... | Banana | nucleus | 25.48 | 32.52 |
| VIT_18s0001g09160.t01 | Wine grape | nucleus | 28.22 | 32.49 |
| KRH52092 | Soybean | nucleus | 27.95 | 32.48 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 27.95 | 32.08 |
| Zm00001d028092_P001 | Maize | cytosol | 23.01 | 30.88 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 26.58 | 29.39 |
| KRH28363 | Soybean | nucleus | 25.21 | 27.79 |
| KRH77118 | Soybean | nucleus | 24.93 | 27.41 |
| Zm00001d005928_P002 | Maize | nucleus | 25.21 | 25.48 |
| Zm00001d003439_P001 | Maize | plastid | 8.77 | 25.2 |
| Zm00001d029407_P001 | Maize | nucleus | 23.84 | 25.14 |
| Zm00001d019696_P001 | Maize | cytosol | 26.03 | 24.55 |
| Zm00001d005293_P001 | Maize | cytosol | 26.03 | 24.3 |
| CDY29570 | Canola | nucleus | 22.19 | 24.25 |
| AT4G37630.1 | Thale cress | nucleus | 21.37 | 24.15 |
| CDX72643 | Canola | nucleus | 22.47 | 24.12 |
| Bra017840.1-P | Field mustard | nucleus | 22.47 | 24.05 |
| Zm00001d018128_P001 | Maize | nucleus | 23.01 | 23.66 |
| Zm00001d050475_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 20.0 | 23.62 |
| Zm00001d052185_P001 | Maize | nucleus | 23.29 | 23.61 |
| Zm00001d022175_P001 | Maize | nucleus | 24.38 | 23.61 |
| Zm00001d021745_P001 | Maize | cytosol, nucleus, plastid | 19.18 | 22.8 |
| Zm00001d020353_P001 | Maize | nucleus | 19.18 | 21.15 |
| Zm00001d031837_P001 | Maize | nucleus | 24.38 | 20.99 |
| Zm00001d044984_P001 | Maize | mitochondrion | 14.79 | 19.57 |
| Zm00001d049334_P001 | Maize | mitochondrion | 13.97 | 17.47 |
| Zm00001d038580_P001 | Maize | plastid | 14.79 | 16.22 |
| Zm00001d048594_P001 | Maize | cytosol | 17.26 | 14.82 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:103626055 | MapMan:13.1.1.1.4 | UniProt:A0A1D6GLQ8 | ProteinID:AQK64246.1 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | PFAM:PF00134 | PFAM:PF02984 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF225 | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI0004DEB776 | EnsemblPlantsGene:Zm00001d013728 | EnsemblPlants:Zm00001d013728_P001 | EnsemblPlants:Zm00001d013728_T001 | SEG:seg |
Description
Cyclin-D5-1
Coordinates
chr5:-:18755410..18756955
Molecular Weight (calculated)
38521.0 Da
IEP (calculated)
4.644
GRAVY (calculated)
-0.058
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEAEERCSA GAGCSFSLTC LEDGADLDTG GSAAESADGG KLAASLYGDA EEDQEYIDHL VSKESSFCRS PSSSLCSPVV SDVSDAGAET CPCPSSMAAS
101: SHEWFRCARR ATVEWVFETQ AYFGFSHRTA YLAVSYMDRF CLHRCMDRSV MPWAARLLAV ACVSLAAKME EYRAPALPEF RADDEYDFSS VSIRRMELLV
201: LSTLGWRMGD VTPLDYLPCL SSSRLRRGGD GGLVAAKAAA LIFSTAEAAS VLDYRPSTVA VAAVLAAAHG AVTKEALESK MSSLSPSSLL DKDDVHACYS
301: TMMLNESSSA TPSKLLAAKR PAPSASGSTG AGSPYESVDA DSSSFAAAAD SNKRARLVEL PAVGR
101: SHEWFRCARR ATVEWVFETQ AYFGFSHRTA YLAVSYMDRF CLHRCMDRSV MPWAARLLAV ACVSLAAKME EYRAPALPEF RADDEYDFSS VSIRRMELLV
201: LSTLGWRMGD VTPLDYLPCL SSSRLRRGGD GGLVAAKAAA LIFSTAEAAS VLDYRPSTVA VAAVLAAAHG AVTKEALESK MSSLSPSSLL DKDDVHACYS
301: TMMLNESSSA TPSKLLAAKR PAPSASGSTG AGSPYESVDA DSSSFAAAAD SNKRARLVEL PAVGR
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.