Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52092 | Soybean | nucleus | 51.42 | 51.91 |
| KRH61407 | Soybean | nucleus | 50.16 | 50.96 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 49.53 | 47.58 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 42.27 | 42.14 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 35.65 | 40.65 |
| GSMUA_Achr10P... | Banana | nucleus | 36.28 | 40.21 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 33.75 | 33.44 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 35.33 | 31.82 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 35.02 | 31.81 |
| Zm00001d030894_P002 | Maize | nucleus | 34.38 | 31.59 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 33.44 | 31.45 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 34.7 | 31.34 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 34.7 | 31.25 |
| Zm00001d041345_P001 | Maize | cytosol | 34.38 | 31.23 |
| VIT_01s0026g00710.t01 | Wine grape | nucleus | 31.86 | 31.17 |
| Os12t0588800-01 | Rice | nucleus | 35.65 | 30.96 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 32.81 | 30.95 |
| EES17294 | Sorghum | nucleus | 35.02 | 30.58 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 32.49 | 30.56 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 35.33 | 29.79 |
| Zm00001d033330_P001 | Maize | nucleus | 33.12 | 29.66 |
| EER91226 | Sorghum | nucleus | 33.75 | 28.92 |
| VIT_12s0134g00500.t01 | Wine grape | nucleus | 26.5 | 28.57 |
| Zm00001d013728_P001 | Maize | cytosol | 32.49 | 28.22 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 30.6 | 28.2 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 29.34 | 28.18 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 30.6 | 27.64 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 26.5 | 27.18 |
| HORVU4Hr1G013700.2 | Barley | plastid | 33.44 | 26.84 |
| EER92677 | Sorghum | nucleus | 29.97 | 26.76 |
| Os03t0203800-01 | Rice | nucleus | 29.02 | 26.67 |
| VIT_00s0322g00010.t01 | Wine grape | nucleus | 25.55 | 26.56 |
| VIT_18s0001g07220.t01 | Wine grape | nucleus | 29.34 | 26.2 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 29.02 | 26.06 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 29.02 | 26.06 |
| VIT_00s0203g00160.t01 | Wine grape | cytosol | 25.55 | 25.63 |
| VIT_00s0194g00280.t01 | Wine grape | mitochondrion | 22.4 | 24.91 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 27.44 | 24.58 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 27.13 | 23.12 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 27.76 | 22.8 |
| VIT_08s0007g00790.t01 | Wine grape | nucleus | 22.08 | 20.71 |
| Zm00001d028092_P001 | Maize | cytosol | 17.67 | 20.59 |
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 6.31 | 16.67 |
| Zm00001d003439_P001 | Maize | plastid | 5.99 | 14.96 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100248932 | wikigene:100248932 | MapMan:13.1.1.1.4 | ProteinID:CBI19408 | ProteinID:CBI19408.3 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | UniProt:E0CP30 | EMBL:FN595227 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EntrezGene:LOC100248932 | wikigene:LOC100248932 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF255 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00015C8063 | ArrayExpress:VIT_18s0001g09160 | EnsemblPlantsGene:VIT_18s0001g09160 |
| EnsemblPlants:VIT_18s0001g09160.t01 | RefSeq:XP_002283315 | RefSeq:XP_002283315.1 | RefSeq:XP_010664519.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr18:-:7627007..7628513
Molecular Weight (calculated)
36077.3 Da
IEP (calculated)
5.486
GRAVY (calculated)
-0.100
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MERDSYSSLL CLDEDVVDEE AFISFKNCTP SDTEDDEYVQ LLVDREMSFG IKTNHSFLIL NWVKLARLDA VAWILRTRAV FGFRFQTAYL CVAYLDRFLS
101: RRAIDSDKTW AIRLLSVACL SLAAKMEECR APALSEFAVE EYNFESKVIQ RMELLVLNTL EWRMGSITPF AFIHYFITKF CNQSPPPNVV SRTVQLTMAI
201: MREINLMDHR PSVIAAAAVL VALDQRLTRN ELESKMNAIS SCGSLQPEDV FSCYSVVQGL DKEKCALSLN PSTTQLRPAV DVHENSSVTS AASTKRKRLT
301: FYDCDPNYGI PNEKRPR
101: RRAIDSDKTW AIRLLSVACL SLAAKMEECR APALSEFAVE EYNFESKVIQ RMELLVLNTL EWRMGSITPF AFIHYFITKF CNQSPPPNVV SRTVQLTMAI
201: MREINLMDHR PSVIAAAAVL VALDQRLTRN ELESKMNAIS SCGSLQPEDV FSCYSVVQGL DKEKCALSLN PSTTQLRPAV DVHENSSVTS AASTKRKRLT
301: FYDCDPNYGI PNEKRPR
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.