Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16827 | Soybean | nucleus | 64.79 | 64.79 |
| KRH72435 | Soybean | nucleus | 63.66 | 63.31 |
| Solyc04g076040.2.1 | Tomato | nucleus | 62.54 | 62.54 |
| PGSC0003DMT400033588 | Potato | nucleus | 62.25 | 62.08 |
| KRH52917 | Soybean | nucleus | 59.44 | 59.94 |
| KRH62196 | Soybean | nucleus | 57.75 | 58.24 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 39.72 | 56.63 |
| GSMUA_Achr10P... | Banana | nucleus | 50.7 | 56.07 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 55.21 | 56.0 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 52.39 | 53.76 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 54.08 | 53.63 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 52.39 | 53.6 |
| GSMUA_Achr10P... | Banana | nucleus | 51.83 | 53.49 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 54.08 | 53.19 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 51.55 | 52.74 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 51.27 | 52.15 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 51.55 | 51.84 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 50.42 | 51.0 |
| TraesCS6B01G345300.1 | Wheat | plastid | 50.7 | 50.99 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 50.42 | 50.0 |
| Solyc12g087900.1.1 | Tomato | nucleus | 43.94 | 49.37 |
| Zm00001d052185_P001 | Maize | nucleus | 49.58 | 48.89 |
| Zm00001d018128_P001 | Maize | nucleus | 48.73 | 48.73 |
| PGSC0003DMT400088718 | Potato | nucleus | 41.97 | 48.06 |
| EES07560 | Sorghum | nucleus | 48.45 | 48.04 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 30.99 | 43.65 |
| VIT_01s0026g00710.t01 | Wine grape | nucleus | 35.21 | 38.58 |
| KXG19603 | Sorghum | nucleus | 37.75 | 38.51 |
| VIT_12s0134g00500.t01 | Wine grape | nucleus | 29.58 | 35.71 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 35.21 | 35.31 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 30.7 | 35.28 |
| VIT_00s0322g00010.t01 | Wine grape | nucleus | 30.14 | 35.08 |
| VIT_00s0194g00280.t01 | Wine grape | mitochondrion | 25.92 | 32.28 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 33.24 | 31.72 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 34.08 | 31.35 |
| VIT_18s0001g09160.t01 | Wine grape | nucleus | 26.2 | 29.34 |
| VIT_00s0203g00160.t01 | Wine grape | cytosol | 24.51 | 27.53 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 25.07 | 26.97 |
| VIT_08s0007g00790.t01 | Wine grape | nucleus | 25.07 | 26.33 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100247298 | wikigene:100247298 | MapMan:13.1.1.1.4 | EMBL:AM438961 | ProteinID:CAN80526 |
| ProteinID:CAN80526.1 | ProteinID:CBI19236 | ProteinID:CBI19236.3 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom |
| InterPro:Cyclin_N | UniProt:E0CRT2 | EMBL:FN595227 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | EntrezGene:LOC100247298 | wikigene:LOC100247298 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF213 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI00015C7BA3 | ArrayExpress:VIT_18s0001g07220 | EnsemblPlantsGene:VIT_18s0001g07220 | EnsemblPlants:VIT_18s0001g07220.t01 | RefSeq:XP_003634482 | RefSeq:XP_003634482.1 |
| RefSeq:XP_003634482.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:5462890..5465587
Molecular Weight (calculated)
39245.0 Da
IEP (calculated)
4.937
GRAVY (calculated)
0.006
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSFDCAAS SLLCGEDNSS IFDDADYGAA AEEFETAWHH QNHRSRNQEK SFNGGEFLIG LPVQSDECLA LMIEKESQHL PAADYLMRLR SGDLDIGSRQ
101: DVVGWIAKAH AHFGFGPLCA YLAINYLDRF LSTYELPKGK AWMAQLLAVA CLSLAAKMEE NEVPLCLDLQ VAESRFVFEA RTIQRMELLV LRTLKWRMQA
201: VTPFSFVDYF LRRINDDEFP ARTSILLSIQ LILSTVKGID FLEFRPSEIA AAVAISIAGE TQTVDIEKAI SVVIEPIEKE RVLKCIELMH DLSLISGSVK
301: RSSTAASVPS VPHTPIGVLD AACLSYKSDD TTVGSCANSS HNKKRKLNAP PEVEL
101: DVVGWIAKAH AHFGFGPLCA YLAINYLDRF LSTYELPKGK AWMAQLLAVA CLSLAAKMEE NEVPLCLDLQ VAESRFVFEA RTIQRMELLV LRTLKWRMQA
201: VTPFSFVDYF LRRINDDEFP ARTSILLSIQ LILSTVKGID FLEFRPSEIA AAVAISIAGE TQTVDIEKAI SVVIEPIEKE RVLKCIELMH DLSLISGSVK
301: RSSTAASVPS VPHTPIGVLD AACLSYKSDD TTVGSCANSS HNKKRKLNAP PEVEL
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.