Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62196 | Soybean | nucleus | 91.48 | 91.48 |
| KRH16827 | Soybean | nucleus | 69.03 | 68.45 |
| KRH72435 | Soybean | nucleus | 68.75 | 67.79 |
| VIT_18s0001g07220.t01 | Wine grape | nucleus | 59.94 | 59.44 |
| PGSC0003DMT400033588 | Potato | nucleus | 57.39 | 56.74 |
| Solyc04g076040.2.1 | Tomato | nucleus | 57.1 | 56.62 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 38.64 | 54.62 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 50.57 | 50.86 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 48.86 | 49.57 |
| GSMUA_Achr10P... | Banana | nucleus | 48.3 | 49.42 |
| GSMUA_Achr10P... | Banana | nucleus | 44.89 | 49.22 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 50.0 | 49.16 |
| PGSC0003DMT400088718 | Potato | nucleus | 43.18 | 49.03 |
| KRH74510 | Soybean | nucleus | 50.0 | 48.75 |
| Solyc12g087900.1.1 | Tomato | nucleus | 43.75 | 48.73 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 48.01 | 48.7 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 47.73 | 48.14 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 47.16 | 47.98 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 47.44 | 46.26 |
| KRH45568 | Soybean | nucleus | 45.45 | 46.24 |
| KRH69654 | Soybean | cytosol | 31.82 | 46.09 |
| KRG99448 | Soybean | nucleus | 46.88 | 46.09 |
| TraesCS6B01G345300.1 | Wheat | plastid | 44.89 | 44.76 |
| Zm00001d052185_P001 | Maize | nucleus | 45.45 | 44.44 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 44.32 | 44.44 |
| Zm00001d018128_P001 | Maize | nucleus | 44.32 | 43.94 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 44.03 | 43.3 |
| EES07560 | Sorghum | nucleus | 43.75 | 43.02 |
| KRH69476 | Soybean | nucleus | 36.08 | 37.46 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 26.14 | 36.51 |
| KXG19603 | Sorghum | nucleus | 36.08 | 36.49 |
| KRH35652 | Soybean | nucleus | 30.4 | 35.43 |
| KRH05626 | Soybean | cytosol | 21.31 | 34.88 |
| KRG91131 | Soybean | nucleus | 31.25 | 33.95 |
| KRG99255 | Soybean | nucleus | 33.24 | 33.62 |
| KRH45743 | Soybean | nucleus | 34.09 | 33.33 |
| KRH58137 | Soybean | nucleus | 29.83 | 33.02 |
| KRH21593 | Soybean | nucleus | 25.28 | 32.72 |
| KRH74675 | Soybean | nucleus, plastid | 34.94 | 32.2 |
| KRH61407 | Soybean | nucleus | 28.12 | 31.73 |
| KRH04404 | Soybean | vacuole | 30.4 | 31.47 |
| KRH04529 | Soybean | nucleus | 32.95 | 31.27 |
| KRH10729 | Soybean | nucleus | 24.15 | 31.25 |
| KRH15412 | Soybean | cytosol | 23.86 | 31.11 |
| KRH28424 | Soybean | nucleus | 29.26 | 30.75 |
| KRH52092 | Soybean | nucleus | 26.99 | 30.25 |
| KRH61348 | Soybean | nucleus | 29.83 | 30.09 |
| KRH22479 | Soybean | cytosol | 26.99 | 30.06 |
| KRH57973 | Soybean | nucleus | 32.67 | 30.03 |
| KRH26876 | Soybean | nucleus | 26.7 | 29.84 |
| KRH77050 | Soybean | nucleus, plastid | 28.12 | 29.64 |
| KRH52038 | Soybean | nucleus | 29.83 | 29.01 |
| KRH28363 | Soybean | nucleus | 26.99 | 28.7 |
| KRH25470 | Soybean | nucleus | 25.85 | 28.09 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 25.85 | 27.66 |
| KRG90996 | Soybean | nucleus | 30.11 | 26.97 |
| KRH35760 | Soybean | nucleus | 30.68 | 26.87 |
| KRH77118 | Soybean | nucleus | 25.28 | 26.81 |
| KRH54628 | Soybean | cytosol | 11.65 | 26.8 |
| KRH54622 | Soybean | cytosol | 11.65 | 26.8 |
| KRH65892 | Soybean | cytosol | 18.75 | 22.92 |
| KRH75669 | Soybean | cytosol | 18.47 | 22.49 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EMBL:ACUP02003442 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom |
| InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_06G094600 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1K9N9 | ProteinID:KRH52915.1 | ProteinID:KRH52916.1 | EnsemblPlants:KRH52917 | ProteinID:KRH52917 | ProteinID:KRH52917.1 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF213 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00023C3D3F | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:7451608..7454887
Molecular Weight (calculated)
39477.4 Da
IEP (calculated)
5.120
GRAVY (calculated)
-0.122
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSFDFASS LLCTEDSTVF DESHNNGGTM MTAMGVYEDT RSPRRRHFDE EPDELPLLSD ESLVMMVEKE CQHWSGLRYL NKFQTGDLDF GARMEAIDWI
101: HKVRSHFGFG PLCGYLSINY LDRFLFAYEL PKGRVWTMQL LAVACLSLAA KLDETEVPLS LDLQVGESKF LFEAKTIQRM ELLVLSTLKW RMQAITPFTF
201: LDYFLCKIND DQSPLRSSIM RSIQLISSTA RGIDFLEFKP SEIAAAVAMY VMGETQTVDT GKAISVLIQH VEKERLLKCV QMIQELSCNS GSAKDSSASV
301: TCLPQSPIGV LDALCFNYKS DDTNASSCVN SSHNSPVAKR RKLNKTCGAE QL
101: HKVRSHFGFG PLCGYLSINY LDRFLFAYEL PKGRVWTMQL LAVACLSLAA KLDETEVPLS LDLQVGESKF LFEAKTIQRM ELLVLSTLKW RMQAITPFTF
201: LDYFLCKIND DQSPLRSSIM RSIQLISSTA RGIDFLEFKP SEIAAAVAMY VMGETQTVDT GKAISVLIQH VEKERLLKCV QMIQELSCNS GSAKDSSASV
301: TCLPQSPIGV LDALCFNYKS DDTNASSCVN SSHNSPVAKR RKLNKTCGAE QL
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKIRG LCRTDREACE
101: VHQFGPLCFC LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL
201: RKMSKCDQEP SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA
301: CCFSFKTHDS SSSYTHLS
101: VHQFGPLCFC LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL
201: RKMSKCDQEP SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA
301: CCFSFKTHDS SSSYTHLS
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.