Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52038 | Soybean | nucleus | 81.38 | 78.45 |
| KRH05626 | Soybean | cytosol | 35.82 | 58.14 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 58.17 | 54.57 |
| KRH15412 | Soybean | cytosol | 41.55 | 53.7 |
| PGSC0003DMT400039904 | Potato | nucleus | 49.28 | 53.42 |
| Solyc12g088650.1.1 | Tomato | nucleus | 49.28 | 52.92 |
| PGSC0003DMT400020648 | Potato | nucleus | 49.28 | 51.81 |
| Solyc04g078470.2.1 | Tomato | nucleus | 49.86 | 51.79 |
| KRH04529 | Soybean | nucleus | 50.43 | 47.44 |
| KRG90996 | Soybean | nucleus | 49.86 | 44.27 |
| KRH57973 | Soybean | nucleus | 48.42 | 44.13 |
| KRH35760 | Soybean | nucleus | 50.14 | 43.53 |
| KRH28424 | Soybean | nucleus | 41.55 | 43.28 |
| KRH77050 | Soybean | nucleus, plastid | 41.26 | 43.11 |
| KRH69654 | Soybean | cytosol | 23.5 | 33.74 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 31.81 | 32.17 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 35.53 | 31.96 |
| KRH35652 | Soybean | nucleus | 27.51 | 31.79 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 32.95 | 31.77 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 36.68 | 31.45 |
| KRH69476 | Soybean | nucleus | 30.37 | 31.27 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.79 | 30.6 |
| KRH62196 | Soybean | nucleus | 30.66 | 30.4 |
| KRH16827 | Soybean | nucleus | 30.66 | 30.14 |
| KRG91131 | Soybean | nucleus | 27.79 | 29.94 |
| KRH52917 | Soybean | nucleus | 30.09 | 29.83 |
| KRH72435 | Soybean | nucleus | 30.37 | 29.69 |
| KRG99255 | Soybean | nucleus | 29.51 | 29.6 |
| KRH58137 | Soybean | nucleus | 26.93 | 29.56 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.8 | 29.38 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.8 | 29.38 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.51 | 29.34 |
| KRH45568 | Soybean | nucleus | 28.94 | 29.19 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.51 | 29.1 |
| KRH74510 | Soybean | nucleus | 30.09 | 29.09 |
| KRH45743 | Soybean | nucleus | 29.8 | 28.89 |
| KRG99448 | Soybean | nucleus | 29.23 | 28.49 |
| Os09t0111100-01 | Rice | cytosol | 29.51 | 28.3 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 32.95 | 28.26 |
| KRH04404 | Soybean | vacuole | 27.22 | 27.94 |
| KRH61407 | Soybean | nucleus | 24.64 | 27.56 |
| KRH65892 | Soybean | cytosol | 22.35 | 27.08 |
| KRH75669 | Soybean | cytosol | 22.35 | 26.99 |
| KRH74675 | Soybean | nucleus, plastid | 29.23 | 26.7 |
| KRH52092 | Soybean | nucleus | 23.78 | 26.43 |
| Zm00001d005293_P001 | Maize | cytosol | 29.51 | 26.34 |
| KRH28363 | Soybean | nucleus | 24.93 | 26.28 |
| EER96424 | Sorghum | cytosol | 28.65 | 26.18 |
| KRH54628 | Soybean | cytosol | 11.46 | 26.14 |
| KRH54622 | Soybean | cytosol | 11.46 | 26.14 |
| KRH77118 | Soybean | nucleus | 24.64 | 25.9 |
| Zm00001d019696_P001 | Maize | cytosol | 28.65 | 25.84 |
| KRH10729 | Soybean | nucleus | 19.2 | 24.63 |
| KRH21593 | Soybean | nucleus | 18.91 | 24.26 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 21.2 | 22.49 |
| KRH25470 | Soybean | nucleus | 20.63 | 22.22 |
| KRH22479 | Soybean | cytosol | 19.48 | 21.52 |
| KRH26876 | Soybean | nucleus | 19.2 | 21.27 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100811122 | MapMan:13.1.1.1.4 | EMBL:ACUP02002161 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_04G042000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1JTM5 | EnsemblPlants:KRH61348 | ProteinID:KRH61348 | ProteinID:KRH61348.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000233A9A6 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:3363014..3365763
Molecular Weight (calculated)
39719.3 Da
IEP (calculated)
4.867
GRAVY (calculated)
-0.219
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYHHQKSLL DTLYCSEEHW IGEGEFDQAE EEYGNSNSNS SSTLVNNSPE SSPHLLLESD MFWDEQELAS LLEKEQHNPL STCCLQSNPA LEGARIEAVE
101: WILKVNAHYS FSALTAVLAV NYFDRFLFSF RFQNDIKPWM TRLAAVACLS LAAKVDETHV PFLIDLQQVE ESRYLFEAKT IKKMEILILS TLGWKMNPPT
201: SLSFLDYFTR RLGLKDHLFW EFLTKSEGVL LSLIGDSRFM SYLPSVLATA TMMQVLKSVE PSLEAEYKSQ LFGILRIDKE KVNSCCKLML ELWSEFEGKQ
301: CMKRKFGIGW IPGSPNGVMD VSFSCDSSSN DSWVSSSPEP LSKKSRSEK
101: WILKVNAHYS FSALTAVLAV NYFDRFLFSF RFQNDIKPWM TRLAAVACLS LAAKVDETHV PFLIDLQQVE ESRYLFEAKT IKKMEILILS TLGWKMNPPT
201: SLSFLDYFTR RLGLKDHLFW EFLTKSEGVL LSLIGDSRFM SYLPSVLATA TMMQVLKSVE PSLEAEYKSQ LFGILRIDKE KVNSCCKLML ELWSEFEGKQ
301: CMKRKFGIGW IPGSPNGVMD VSFSCDSSSN DSWVSSSPEP LSKKSRSEK
001: MALEEEEESQ NAPFCVLDGL FCEEESEFHE QVDLCDESVE KFPFLNLGLS DHDMLWDDDE LSTLISKQEP CLYDEILDDE FLVLCREKAL DWIFKVKSHY
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
Arabidopsis Description
CYCD3-3CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.