Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77118 | Soybean | nucleus | 88.52 | 88.25 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 48.04 | 48.18 |
| KRH52092 | Soybean | nucleus | 41.99 | 44.27 |
| KRH61407 | Soybean | nucleus | 40.79 | 43.27 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 33.23 | 39.57 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 36.86 | 38.36 |
| GSMUA_Achr10P... | Banana | nucleus | 32.93 | 38.11 |
| CDY29570 | Canola | nucleus | 34.74 | 34.43 |
| CDX72643 | Canola | nucleus | 35.35 | 34.41 |
| Bra017840.1-P | Field mustard | nucleus | 35.05 | 34.02 |
| AT4G37630.1 | Thale cress | nucleus | 32.93 | 33.75 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 31.42 | 32.5 |
| KRH69476 | Soybean | nucleus | 29.61 | 28.91 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 30.51 | 28.69 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 30.21 | 28.65 |
| Zm00001d041345_P001 | Maize | cytosol | 30.21 | 28.65 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 30.21 | 28.49 |
| KRH35652 | Soybean | nucleus | 25.98 | 28.48 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 30.21 | 28.41 |
| Zm00001d030894_P002 | Maize | nucleus | 29.61 | 28.41 |
| KRH45568 | Soybean | nucleus | 29.61 | 28.32 |
| EES17294 | Sorghum | nucleus | 30.82 | 28.1 |
| KRH05626 | Soybean | cytosol | 18.13 | 27.91 |
| KRG99255 | Soybean | nucleus | 29.31 | 27.87 |
| KRH58137 | Soybean | nucleus | 26.59 | 27.67 |
| KRH16827 | Soybean | nucleus | 29.61 | 27.61 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 27.49 | 27.58 |
| KRH45743 | Soybean | nucleus | 29.91 | 27.5 |
| KRH72435 | Soybean | nucleus | 29.61 | 27.45 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 27.79 | 27.3 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 27.49 | 27.08 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 28.7 | 27.07 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 27.49 | 27.0 |
| KRH52917 | Soybean | nucleus | 28.7 | 26.99 |
| KRG91131 | Soybean | nucleus | 26.28 | 26.85 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 27.79 | 26.74 |
| Os12t0588800-01 | Rice | nucleus | 29.31 | 26.58 |
| Os03t0203800-01 | Rice | nucleus | 27.49 | 26.38 |
| EER91226 | Sorghum | nucleus | 29.31 | 26.22 |
| Zm00001d033330_P001 | Maize | nucleus | 27.79 | 25.99 |
| KRG99448 | Soybean | nucleus | 28.1 | 25.98 |
| KRH69654 | Soybean | cytosol | 19.03 | 25.93 |
| KRH04404 | Soybean | vacuole | 26.59 | 25.88 |
| KRH10729 | Soybean | nucleus | 21.15 | 25.74 |
| KRH74675 | Soybean | nucleus, plastid | 29.31 | 25.39 |
| KRH21593 | Soybean | nucleus | 20.85 | 25.37 |
| Zm00001d013728_P001 | Maize | cytosol | 27.79 | 25.21 |
| EER92677 | Sorghum | nucleus | 26.89 | 25.07 |
| KRH62196 | Soybean | nucleus | 26.59 | 25.0 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 28.4 | 25.0 |
| KRH61348 | Soybean | nucleus | 26.28 | 24.93 |
| KRH74510 | Soybean | nucleus | 26.59 | 24.38 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 25.38 | 23.8 |
| KRH65892 | Soybean | cytosol | 20.24 | 23.26 |
| KRH75669 | Soybean | cytosol | 20.24 | 23.18 |
| KRH25470 | Soybean | nucleus | 22.66 | 23.15 |
| KRH22479 | Soybean | cytosol | 22.05 | 23.1 |
| HORVU4Hr1G013700.2 | Barley | plastid | 27.49 | 23.04 |
| KRH28424 | Soybean | nucleus | 23.26 | 22.99 |
| KRH26876 | Soybean | nucleus | 21.75 | 22.86 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 22.66 | 22.8 |
| KRH52038 | Soybean | nucleus | 24.77 | 22.65 |
| KRH04529 | Soybean | nucleus | 25.38 | 22.64 |
| KRH15412 | Soybean | cytosol | 18.43 | 22.59 |
| KRH77050 | Soybean | nucleus, plastid | 22.36 | 22.16 |
| KRH57973 | Soybean | nucleus | 25.38 | 21.93 |
| KRG90996 | Soybean | nucleus | 25.98 | 21.88 |
| Zm00001d028092_P001 | Maize | cytosol | 17.52 | 21.32 |
| KRH54628 | Soybean | cytosol | 9.67 | 20.91 |
| KRH54622 | Soybean | cytosol | 9.67 | 20.91 |
| KRH35760 | Soybean | nucleus | 25.38 | 20.9 |
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 5.44 | 15.0 |
| Zm00001d003439_P001 | Maize | plastid | 5.44 | 14.17 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100798140 | MapMan:13.1.1.1.4 | EMBL:ACUP02006747 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_11G048500 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:K7LN36 | EnsemblPlants:KRH28363 | ProteinID:KRH28363 | ProteinID:KRH28363.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF255 | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI00023CD7DB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:3621762..3624268
Molecular Weight (calculated)
37545.5 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.233
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSGTFFSL SSLLCDEVGE AGFFEDPDEN PGIFYSLDNP CFVLEDEELY IEYLFKQETG FGSQNHHLFA SDDHSNSRHW LRSARVDAID WIFDTQAKFG
101: FKVETAYLSV TYFDRFLSER SIDESKPWAI RLLSVACLSL AAKMEEQNVP PLSEYPIEDY RFENKVIKNM ELMILSTLDW KMGSATPFAY LHYFVGKFCP
201: GSRPQSIITK AIEHIVAMIK DVNLMDQRPS IIASAAILAA LDATLTRKAM DLRINVISSW GNLESGHVFF CYNLIQEKRK SKVKTPCSNL MSTKSSSTCV
301: LENQSDTFSG AKRKLSFEDS ENCAGQKLHR P
101: FKVETAYLSV TYFDRFLSER SIDESKPWAI RLLSVACLSL AAKMEEQNVP PLSEYPIEDY RFENKVIKNM ELMILSTLDW KMGSATPFAY LHYFVGKFCP
201: GSRPQSIITK AIEHIVAMIK DVNLMDQRPS IIASAAILAA LDATLTRKAM DLRINVISSW GNLESGHVFF CYNLIQEKRK SKVKTPCSNL MSTKSSSTCV
301: LENQSDTFSG AKRKLSFEDS ENCAGQKLHR P
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.