Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29570 | Canola | nucleus | 82.97 | 80.24 |
| Bra017840.1-P | Field mustard | nucleus | 83.9 | 79.47 |
| CDX72643 | Canola | nucleus | 83.59 | 79.41 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 36.53 | 35.76 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 28.79 | 33.45 |
| KRH28363 | Soybean | nucleus | 33.75 | 32.93 |
| KRH77118 | Soybean | nucleus | 33.44 | 32.53 |
| GSMUA_Achr10P... | Banana | nucleus | 28.48 | 32.17 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 29.72 | 30.19 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 28.17 | 27.08 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 29.41 | 27.07 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 29.41 | 26.99 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 29.41 | 26.99 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 29.1 | 26.93 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 27.86 | 26.71 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 27.86 | 26.71 |
| Os12t0588800-01 | Rice | nucleus | 29.72 | 26.3 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 26.01 | 26.25 |
| Zm00001d030894_P002 | Maize | nucleus | 27.86 | 26.09 |
| Zm00001d041345_P001 | Maize | cytosol | 28.17 | 26.07 |
| EES17294 | Sorghum | nucleus | 29.1 | 25.9 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 24.77 | 24.24 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 26.32 | 24.22 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 25.7 | 24.13 |
| Zm00001d033330_P001 | Maize | nucleus | 25.7 | 23.45 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 26.93 | 23.14 |
| EER91226 | Sorghum | nucleus | 26.32 | 22.97 |
| AT4G34160.1 | Thale cress | nucleus | 26.63 | 22.87 |
| EER92677 | Sorghum | nucleus | 25.08 | 22.82 |
| HORVU4Hr1G013700.2 | Barley | plastid | 27.86 | 22.78 |
| AT1G70210.1 | Thale cress | nucleus | 23.84 | 22.71 |
| AT5G65420.3 | Thale cress | nucleus | 22.29 | 22.64 |
| Os03t0203800-01 | Rice | nucleus | 24.15 | 22.61 |
| AT5G10440.1 | Thale cress | nucleus | 20.74 | 22.48 |
| AT2G22490.2 | Thale cress | nucleus | 24.46 | 21.82 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 23.53 | 21.53 |
| Zm00001d013728_P001 | Maize | cytosol | 24.15 | 21.37 |
| AT3G50070.1 | Thale cress | nucleus | 23.22 | 20.78 |
| AT4G03270.1 | Thale cress | nucleus | 18.27 | 19.54 |
| AT5G67260.2 | Thale cress | nucleus | 24.15 | 19.31 |
| Zm00001d028092_P001 | Maize | cytosol | 15.17 | 18.01 |
| AT5G02110.1 | Thale cress | cytosol | 16.1 | 15.25 |
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 5.57 | 15.0 |
| Zm00001d003439_P001 | Maize | plastid | 4.64 | 11.81 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EntrezGene:829917 | ProteinID:AEE86817.1 | EMBL:AK221431 | ArrayExpress:AT4G37630 |
| EnsemblPlantsGene:AT4G37630 | RefSeq:AT4G37630 | TAIR:AT4G37630 | RefSeq:AT4G37630-TAIR-G | EnsemblPlants:AT4G37630.1 | TAIR:AT4G37630.1 |
| Unigene:At.43466 | EMBL:BT011732 | ProteinID:CAB38302.1 | ProteinID:CAB80428.1 | Symbol:CYCD5;1 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042023 | GO:GO:0051301 |
| RefSeq:NP_195478.2 | PFAM:PF00134 | PIRSF:PIRSF001771 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020094 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF255 | UniProt:Q2V3B2 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0000162BB2 | SEG:seg |
Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
Coordinates
chr4:+:17679168..17681264
Molecular Weight (calculated)
37168.9 Da
IEP (calculated)
5.151
GRAVY (calculated)
-0.402
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.