Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13755 | Canola | nucleus | 65.19 | 80.82 |
| Bra038518.1-P | Field mustard | nucleus | 64.64 | 80.69 |
| CDX76917 | Canola | nucleus | 75.69 | 77.4 |
| CDY25602 | Canola | nucleus | 75.97 | 77.25 |
| Bra030232.1-P | Field mustard | nucleus | 75.41 | 76.9 |
| CDX89480 | Canola | nucleus | 75.41 | 76.9 |
| Solyc05g051410.2.1 | Tomato | nucleus | 46.13 | 48.55 |
| Solyc11g010460.1.1 | Tomato | cytosol | 41.44 | 48.08 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 32.87 | 47.79 |
| PGSC0003DMT400037827 | Potato | nucleus | 45.3 | 47.67 |
| GSMUA_Achr10P... | Banana | nucleus | 41.71 | 47.04 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 44.48 | 46.0 |
| KRH45568 | Soybean | nucleus | 43.92 | 45.95 |
| KRG99448 | Soybean | nucleus | 45.3 | 45.81 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 43.65 | 45.53 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 43.65 | 44.76 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 42.82 | 44.67 |
| AT5G65420.3 | Thale cress | nucleus | 39.23 | 44.65 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 42.54 | 44.51 |
| AT5G10440.1 | Thale cress | nucleus | 36.19 | 43.96 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 41.71 | 43.27 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 42.27 | 42.74 |
| GSMUA_Achr10P... | Banana | nucleus | 40.61 | 42.73 |
| KRH74510 | Soybean | nucleus | 42.54 | 42.66 |
| KRH69654 | Soybean | cytosol | 28.18 | 41.98 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 41.44 | 41.55 |
| PGSC0003DMT400041637 | Potato | nucleus | 44.75 | 41.12 |
| Zm00001d052185_P001 | Maize | nucleus | 40.06 | 40.28 |
| TraesCS6B01G345300.1 | Wheat | plastid | 39.23 | 40.23 |
| Zm00001d018128_P001 | Maize | nucleus | 38.95 | 39.72 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 38.4 | 39.6 |
| EES07560 | Sorghum | nucleus | 38.95 | 39.39 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 38.67 | 39.11 |
| KXG19603 | Sorghum | nucleus | 36.19 | 37.64 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 23.2 | 33.33 |
| AT1G70210.1 | Thale cress | nucleus | 30.94 | 33.04 |
| AT3G50070.1 | Thale cress | nucleus | 30.66 | 30.75 |
| AT4G34160.1 | Thale cress | nucleus | 27.62 | 26.6 |
| AT5G67260.2 | Thale cress | nucleus | 29.01 | 25.99 |
| AT4G03270.1 | Thale cress | nucleus | 20.99 | 25.17 |
| AT4G37630.1 | Thale cress | nucleus | 21.82 | 24.46 |
| AT5G02110.1 | Thale cress | cytosol | 18.51 | 19.65 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EntrezGene:816782 | ProteinID:AEC07314.1 | ArrayExpress:AT2G22490 | EnsemblPlantsGene:AT2G22490 |
| RefSeq:AT2G22490 | TAIR:AT2G22490 | RefSeq:AT2G22490-TAIR-G | EnsemblPlants:AT2G22490.2 | TAIR:AT2G22490.2 | Unigene:At.9 |
| Symbol:CYCD2;1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | UniProt:F4IJJ3 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009744 | RefSeq:NP_001189576.1 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0001E92CBD | SEG:seg | : | : |
Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
Coordinates
chr2:-:9553803..9556145
Molecular Weight (calculated)
40710.0 Da
IEP (calculated)
4.705
GRAVY (calculated)
-0.327
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.