Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74510 | Soybean | nucleus | 83.54 | 56.23 |
| Solyc11g010460.1.1 | Tomato | cytosol | 52.67 | 41.03 |
| CDX81286 | Canola | nucleus | 43.62 | 39.85 |
| KRH45568 | Soybean | nucleus | 56.38 | 39.6 |
| CDY54717 | Canola | nucleus | 42.8 | 39.1 |
| KRG99448 | Soybean | nucleus | 56.79 | 38.55 |
| Bra037817.1-P | Field mustard | nucleus | 43.62 | 37.59 |
| PGSC0003DMT400037827 | Potato | nucleus | 51.03 | 36.05 |
| Solyc05g051410.2.1 | Tomato | nucleus | 50.62 | 35.76 |
| AT5G10440.1 | Thale cress | nucleus | 43.62 | 35.57 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 49.79 | 34.87 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 50.62 | 34.84 |
| CDX97009 | Canola | nucleus | 41.56 | 34.47 |
| Bra031858.1-P | Field mustard | nucleus | 42.39 | 34.45 |
| CDY33959 | Canola | nucleus | 42.8 | 34.1 |
| Bra009031.1-P | Field mustard | nucleus | 41.56 | 34.01 |
| AT5G65420.3 | Thale cress | nucleus | 44.44 | 33.96 |
| Bra024383.1-P | Field mustard | nucleus | 42.8 | 33.77 |
| CDX69832 | Canola | nucleus | 41.15 | 33.67 |
| CDY08795 | Canola | nucleus | 42.39 | 33.44 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 47.74 | 33.43 |
| CDY37828 | Canola | nucleus | 42.39 | 33.33 |
| GSMUA_Achr10P... | Banana | nucleus | 44.03 | 33.33 |
| KRH16827 | Soybean | nucleus | 48.15 | 32.96 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 47.33 | 32.86 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 46.5 | 32.66 |
| KRH05626 | Soybean | cytosol | 28.81 | 32.56 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 33.33 | 32.53 |
| PGSC0003DMT400041637 | Potato | nucleus | 52.26 | 32.23 |
| Bra038518.1-P | Field mustard | nucleus | 38.27 | 32.07 |
| CDY14561 | Canola | cytosol | 42.8 | 32.0 |
| KRH72435 | Soybean | nucleus | 46.91 | 31.93 |
| CDY13755 | Canola | nucleus | 38.27 | 31.85 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 46.91 | 31.84 |
| KRH52917 | Soybean | nucleus | 46.09 | 31.82 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 45.68 | 31.81 |
| GSMUA_Achr10P... | Banana | nucleus | 44.44 | 31.4 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 45.68 | 30.75 |
| KRH62196 | Soybean | nucleus | 44.44 | 30.68 |
| TraesCS6B01G345300.1 | Wheat | plastid | 44.03 | 30.31 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 43.62 | 30.2 |
| CDX76917 | Canola | nucleus | 43.62 | 29.94 |
| KXG19603 | Sorghum | nucleus | 42.8 | 29.89 |
| Bra030232.1-P | Field mustard | nucleus | 43.62 | 29.86 |
| CDY25602 | Canola | nucleus | 43.62 | 29.78 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 43.62 | 29.61 |
| CDX89480 | Canola | nucleus | 42.39 | 29.01 |
| Zm00001d052185_P001 | Maize | nucleus | 42.39 | 28.61 |
| Zm00001d018128_P001 | Maize | nucleus | 41.56 | 28.45 |
| AT2G22490.2 | Thale cress | nucleus | 41.98 | 28.18 |
| EES07560 | Sorghum | nucleus | 41.15 | 27.93 |
| KRH54628 | Soybean | cytosol | 16.87 | 26.8 |
| KRH54622 | Soybean | cytosol | 16.87 | 26.8 |
| KRH15412 | Soybean | cytosol | 29.63 | 26.67 |
| KRH35652 | Soybean | nucleus | 31.69 | 25.5 |
| KRH69476 | Soybean | nucleus | 34.57 | 24.78 |
| KRG91131 | Soybean | nucleus | 32.92 | 24.69 |
| KRH61407 | Soybean | nucleus | 31.28 | 24.36 |
| KRH52092 | Soybean | nucleus | 31.28 | 24.2 |
| KRH61348 | Soybean | nucleus | 33.74 | 23.5 |
| KRG99255 | Soybean | nucleus | 33.33 | 23.28 |
| KRH52038 | Soybean | nucleus | 34.57 | 23.2 |
| KRH45743 | Soybean | nucleus | 33.74 | 22.78 |
| KRH28424 | Soybean | nucleus | 31.28 | 22.69 |
| KRH58137 | Soybean | nucleus | 29.63 | 22.64 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 23.05 | 22.22 |
| KRH21593 | Soybean | nucleus | 24.69 | 22.06 |
| KRH77050 | Soybean | nucleus, plastid | 30.04 | 21.86 |
| KRH74675 | Soybean | nucleus, plastid | 34.16 | 21.73 |
| KRH10729 | Soybean | nucleus | 24.28 | 21.69 |
| KRH65892 | Soybean | cytosol | 25.51 | 21.53 |
| KRH04404 | Soybean | vacuole | 30.04 | 21.47 |
| KRH75669 | Soybean | cytosol | 25.51 | 21.45 |
| KRH04529 | Soybean | nucleus | 31.69 | 20.75 |
| KRH35760 | Soybean | nucleus | 33.33 | 20.15 |
| KRH57973 | Soybean | nucleus | 31.69 | 20.1 |
| KRG90996 | Soybean | nucleus | 32.51 | 20.1 |
| KRH22479 | Soybean | cytosol | 25.51 | 19.62 |
| KRH26876 | Soybean | nucleus | 25.1 | 19.37 |
| KRH28363 | Soybean | nucleus | 25.93 | 19.03 |
| KRH77118 | Soybean | nucleus | 25.51 | 18.67 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 24.69 | 18.24 |
| KRH25470 | Soybean | nucleus | 23.87 | 17.9 |
Protein Annotations
| EMBL:ACUP02000726 | EMBL:ACUP02000727 | EnsemblPlants:KRH69654 | EnsemblPlantsGene:GLYMA_02G040500 | Gene3D:1.10.472.10 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_N | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | PFAM:PF00134 | PIRSF:PIRSF001771 |
| ProteinID:KRH69654 | ProteinID:KRH69654.1 | ScanProsite:PS00292 | SEG:seg | SMART:SM00385 | SUPFAM:SSF47954 |
| UniParc:UPI0006EDA17A | UniProt:A0A0R0KS48 | MapMan:13.1.1.1.4 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:3801485..3803983
Molecular Weight (calculated)
27155.9 Da
IEP (calculated)
4.674
GRAVY (calculated)
0.185
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHNSDSATS NLLLLCSENS STCFDDDGLE CDAADGSNSR ISHHEGGGGS ELLLACFVAQ SEEAVRAMVE REKEHLPRDD YLMRLRSGGL DLDLLGVRKE
101: ALDWIWKAHS YLGFGPLSFC LAVNYLDRFL SVFELPRGVS WTVQLLAVAC LSIAAKMEEI KVPQSVDLQV GELKFLFEAR TIQKMELLVL STLRWKMCAI
201: TPCSFIDYFL VHLVWLNGEF GVVLEFLGNI LNESLLRMNK MGI
101: ALDWIWKAHS YLGFGPLSFC LAVNYLDRFL SVFELPRGVS WTVQLLAVAC LSIAAKMEEI KVPQSVDLQV GELKFLFEAR TIQKMELLVL STLRWKMCAI
201: TPCSFIDYFL VHLVWLNGEF GVVLEFLGNI LNESLLRMNK MGI
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKACE VHQFGPLCFC
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGEK KSLSFMFYFL DHFCFCAFLG FV
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGEK KSLSFMFYFL DHFCFCAFLG FV
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.