Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81286 | Canola | nucleus | 93.61 | 93.61 |
| Bra037817.1-P | Field mustard | nucleus | 96.62 | 91.13 |
| CDY08795 | Canola | nucleus | 80.45 | 69.48 |
| CDY37828 | Canola | nucleus | 79.32 | 68.28 |
| CDY33959 | Canola | nucleus | 78.2 | 68.2 |
| AT5G65420.3 | Thale cress | nucleus | 78.95 | 66.04 |
| CDY14561 | Canola | cytosol | 79.7 | 65.23 |
| CDX97009 | Canola | nucleus | 60.53 | 54.95 |
| CDX69832 | Canola | nucleus | 60.9 | 54.55 |
| KRH69654 | Soybean | cytosol | 39.1 | 42.8 |
| Solyc11g010460.1.1 | Tomato | cytosol | 47.74 | 40.71 |
| PGSC0003DMT400037827 | Potato | nucleus | 51.13 | 39.53 |
| Solyc05g051410.2.1 | Tomato | nucleus | 50.38 | 38.95 |
| CDY13755 | Canola | nucleus | 42.48 | 38.7 |
| KRH45568 | Soybean | nucleus | 48.5 | 37.28 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 48.5 | 37.18 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 34.59 | 36.95 |
| CDY25602 | Canola | nucleus | 48.87 | 36.52 |
| CDX89480 | Canola | nucleus | 48.5 | 36.34 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 48.12 | 36.26 |
| KRG99448 | Soybean | nucleus | 48.12 | 35.75 |
| GSMUA_Achr10P... | Banana | nucleus | 42.86 | 35.51 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 45.86 | 35.16 |
| CDX76917 | Canola | nucleus | 46.62 | 35.03 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 46.99 | 34.92 |
| KRH74510 | Soybean | nucleus | 47.37 | 34.9 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 45.86 | 34.86 |
| TraesCS6B01G345300.1 | Wheat | plastid | 46.24 | 34.84 |
| PGSC0003DMT400041637 | Potato | nucleus | 51.5 | 34.77 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 45.86 | 34.76 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 44.74 | 34.1 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 43.98 | 33.81 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 45.49 | 33.8 |
| Zm00001d018128_P001 | Maize | nucleus | 44.74 | 33.52 |
| GSMUA_Achr10P... | Banana | nucleus | 43.23 | 33.43 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 45.11 | 33.24 |
| Zm00001d052185_P001 | Maize | nucleus | 44.74 | 33.06 |
| KXG19603 | Sorghum | nucleus | 42.11 | 32.18 |
| EES07560 | Sorghum | nucleus | 43.23 | 32.12 |
| CDY11608 | Canola | nucleus | 35.71 | 29.97 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 18.8 | 29.07 |
| CDY38800 | Canola | nucleus | 34.59 | 28.84 |
| CDY67142 | Canola | nucleus | 35.71 | 28.02 |
| CDY59943 | Canola | nucleus | 36.09 | 26.59 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 23.68 | 25.0 |
| CDY02095 | Canola | nucleus | 30.45 | 24.7 |
| CDX83112 | Canola | nucleus | 32.33 | 24.43 |
| CDY22116 | Canola | nucleus | 27.07 | 24.16 |
| CDX68573 | Canola | nucleus | 31.95 | 24.15 |
| CDY23022 | Canola | nucleus | 29.7 | 24.01 |
| CDY17742 | Canola | nucleus | 31.58 | 23.66 |
| CDY30607 | Canola | nucleus | 31.2 | 23.51 |
| CDY21951 | Canola | nucleus | 26.69 | 23.51 |
| CDY12825 | Canola | nucleus | 30.45 | 22.63 |
| CDX76265 | Canola | nucleus | 30.45 | 22.19 |
| CDY01425 | Canola | nucleus | 29.32 | 22.03 |
| CDY57741 | Canola | nucleus | 30.08 | 21.92 |
| CDY49278 | Canola | nucleus | 29.7 | 21.41 |
| CDY69708 | Canola | nucleus | 30.08 | 21.39 |
| CDX72453 | Canola | nucleus | 28.95 | 21.39 |
| CDX75405 | Canola | nucleus | 29.7 | 21.18 |
| CDY29570 | Canola | nucleus | 25.94 | 20.66 |
| CDX90892 | Canola | nucleus | 11.65 | 20.39 |
| CDX72643 | Canola | nucleus | 25.94 | 20.29 |
| CDY10467 | Canola | cytosol | 22.93 | 17.99 |
| CDY40332 | Canola | cytosol | 22.56 | 17.65 |
| CDY55121 | Canola | cytosol | 22.18 | 17.2 |
| CDX80803 | Canola | cytosol | 22.18 | 13.08 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078IU17 | UniProt:A0A078IU17 | EnsemblPlants:CDY54717 | ProteinID:CDY54717 |
| ProteinID:CDY54717.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00014588001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE33EC | SEG:seg | : | : | : | : |
Description
BnaA09g52480DBnaA09g52480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IU17]
Coordinates
chrLK033345:+:38645..39985
Molecular Weight (calculated)
30310.6 Da
IEP (calculated)
4.937
GRAVY (calculated)
-0.180
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHLEQSLL CTETTNVGDE DNGMIVDKVL ISQMGFPLES QEIIREMMEK EKQHLPSDDY IKRLRSGDLD LNARRTEALN WIWKACEEHQ FGPLCVCLSV
101: NYLDRFLSVH DHPNIDKAWT MQLLAVACLS LAAKIEETEV PLLIDLQVGD PQFMFEPKSI QRMELLVLNR LEWRLRAITP CSYIRYFLRK MSKCDQEPSN
201: TLISRSLQVI ASKTKAGIGF LDFRPSEVAA AVALSVSGEM HTVHFDNSPL FSLLQKFQGN ASYGED
101: NYLDRFLSVH DHPNIDKAWT MQLLAVACLS LAAKIEETEV PLLIDLQVGD PQFMFEPKSI QRMELLVLNR LEWRLRAITP CSYIRYFLRK MSKCDQEPSN
201: TLISRSLQVI ASKTKAGIGF LDFRPSEVAA AVALSVSGEM HTVHFDNSPL FSLLQKFQGN ASYGED
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKACE VHQFGPLCFC
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK VKNNPPNISN S
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK VKNNPPNISN S
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.