Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038518.1-P | Field mustard | nucleus | 98.97 | 99.66 |
| CDX76917 | Canola | nucleus | 96.92 | 79.94 |
| CDY25602 | Canola | nucleus | 89.04 | 73.03 |
| CDX89480 | Canola | nucleus | 87.67 | 72.11 |
| AT2G22490.2 | Thale cress | nucleus | 80.82 | 65.19 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 40.41 | 47.39 |
| Solyc05g051410.2.1 | Tomato | nucleus | 52.74 | 44.77 |
| Solyc11g010460.1.1 | Tomato | cytosol | 47.6 | 44.55 |
| PGSC0003DMT400037827 | Potato | nucleus | 52.05 | 44.19 |
| CDX81286 | Canola | nucleus | 39.73 | 43.61 |
| CDX69832 | Canola | nucleus | 44.18 | 43.43 |
| KRH45568 | Soybean | nucleus | 51.37 | 43.35 |
| KRG99448 | Soybean | nucleus | 53.08 | 43.3 |
| CDX97009 | Canola | nucleus | 43.15 | 43.0 |
| CDY08795 | Canola | nucleus | 44.86 | 42.53 |
| CDY54717 | Canola | nucleus | 38.7 | 42.48 |
| GSMUA_Achr10P... | Banana | nucleus | 49.66 | 42.15 |
| GSMUA_Achr10P... | Banana | nucleus | 45.21 | 41.12 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 49.66 | 41.08 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 48.29 | 40.63 |
| KRH74510 | Soybean | nucleus | 50.0 | 40.44 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 47.95 | 40.35 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 48.29 | 40.29 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 47.26 | 39.88 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 47.6 | 39.83 |
| CDY14561 | Canola | cytosol | 43.84 | 39.38 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 47.6 | 38.83 |
| CDY33959 | Canola | nucleus | 40.07 | 38.36 |
| PGSC0003DMT400041637 | Potato | nucleus | 51.71 | 38.32 |
| KRH69654 | Soybean | cytosol | 31.85 | 38.27 |
| CDY37828 | Canola | nucleus | 40.07 | 37.86 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 46.58 | 37.67 |
| TraesCS6B01G345300.1 | Wheat | plastid | 44.52 | 36.83 |
| EES07560 | Sorghum | nucleus | 44.52 | 36.31 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 43.49 | 36.18 |
| Zm00001d052185_P001 | Maize | nucleus | 44.52 | 36.11 |
| Zm00001d018128_P001 | Maize | nucleus | 43.49 | 35.77 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 43.84 | 35.75 |
| KXG19603 | Sorghum | nucleus | 39.04 | 32.76 |
| CDY11608 | Canola | nucleus | 34.93 | 32.18 |
| CDY38800 | Canola | nucleus | 34.59 | 31.66 |
| CDY67142 | Canola | nucleus | 36.3 | 31.27 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 25.34 | 29.37 |
| CDY59943 | Canola | nucleus | 36.3 | 29.36 |
| CDX68573 | Canola | nucleus | 34.25 | 28.41 |
| CDX83112 | Canola | nucleus | 34.25 | 28.41 |
| CDY17742 | Canola | nucleus | 34.25 | 28.17 |
| CDY30607 | Canola | nucleus | 33.9 | 28.05 |
| CDY02095 | Canola | nucleus | 31.16 | 27.74 |
| CDY23022 | Canola | nucleus | 30.82 | 27.36 |
| CDX72453 | Canola | nucleus | 31.51 | 25.56 |
| CDY57741 | Canola | nucleus | 31.85 | 25.48 |
| CDX76265 | Canola | nucleus | 31.51 | 25.21 |
| CDY49278 | Canola | nucleus | 31.85 | 25.2 |
| CDY22116 | Canola | nucleus | 25.68 | 25.17 |
| CDX75405 | Canola | nucleus | 31.51 | 24.66 |
| CDY69708 | Canola | nucleus | 31.51 | 24.6 |
| CDY12825 | Canola | nucleus | 30.14 | 24.58 |
| CDY01425 | Canola | nucleus | 29.79 | 24.58 |
| CDY21951 | Canola | nucleus | 25.34 | 24.5 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 14.38 | 24.42 |
| CDX90892 | Canola | nucleus | 10.96 | 21.05 |
| CDY29570 | Canola | nucleus | 23.29 | 20.36 |
| CDX72643 | Canola | nucleus | 23.29 | 20.0 |
| CDY10467 | Canola | cytosol | 22.6 | 19.47 |
| CDY55121 | Canola | cytosol | 22.6 | 19.24 |
| CDY40332 | Canola | cytosol | 22.26 | 19.12 |
| CDX80803 | Canola | cytosol | 22.95 | 14.86 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078FH53 | UniProt:A0A078FH53 | EnsemblPlants:CDY13755 | ProteinID:CDY13755 |
| ProteinID:CDY13755.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00078188001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004EE6662 | SEG:seg | : | : | : |
Description
BnaA09g42570DBnaA09g42570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH53]
Coordinates
chrLK032038:+:180098..182286
Molecular Weight (calculated)
33097.5 Da
IEP (calculated)
7.312
GRAVY (calculated)
-0.303
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEREVEFLP GADYLKRLRS GDWELRVRNQ ALDWILKVCA HYNFGTLCIC LSMNYLDRFL TSYELPRDKT WAVQLLAVSC LSLAAKMEES DVPQTVELQQ
101: VGDPKFVFEA KTVKRMELLV LNTLNWRLQA LTPFSFIDHF IHKTNGHVSE NSIYRSSQFI LNTTKAIEFL DFRPSEIAAA AAASVSISGE VNCIDDEKTM
201: SNLTYVKQQE RVKVCLNLMR NLTGEDVTGA TLSPQQPRLA ARVVPVSPIG VLEATCLSYR SDERTVESCT NSSQSSPDTN NNNNSNKRRR KQ
101: VGDPKFVFEA KTVKRMELLV LNTLNWRLQA LTPFSFIDHF IHKTNGHVSE NSIYRSSQFI LNTTKAIEFL DFRPSEIAAA AAASVSISGE VNCIDDEKTM
201: SNLTYVKQQE RVKVCLNLMR NLTGEDVTGA TLSPQQPRLA ARVVPVSPIG VLEATCLSYR SDERTVESCT NSSQSSPDTN NNNNSNKRRR KQ
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.