Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031858.1-P | Field mustard | nucleus | 96.12 | 99.33 |
| CDY33959 | Canola | nucleus | 96.12 | 97.38 |
| CDY54717 | Canola | nucleus | 68.28 | 79.32 |
| CDX81286 | Canola | nucleus | 66.67 | 77.44 |
| CDY08795 | Canola | nucleus | 73.79 | 74.03 |
| AT5G65420.3 | Thale cress | nucleus | 75.08 | 72.96 |
| CDY14561 | Canola | cytosol | 75.08 | 71.38 |
| CDX69832 | Canola | nucleus | 55.99 | 58.25 |
| CDX97009 | Canola | nucleus | 54.37 | 57.34 |
| Solyc11g010460.1.1 | Tomato | cytosol | 44.66 | 44.23 |
| KRH69654 | Soybean | cytosol | 33.33 | 42.39 |
| PGSC0003DMT400037827 | Potato | nucleus | 45.63 | 40.99 |
| Solyc05g051410.2.1 | Tomato | nucleus | 44.98 | 40.41 |
| CDY13755 | Canola | nucleus | 37.86 | 40.07 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 32.04 | 39.76 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 44.01 | 38.53 |
| KRH74510 | Soybean | nucleus | 44.98 | 38.5 |
| GSMUA_Achr10P... | Banana | nucleus | 39.81 | 38.32 |
| TraesCS6B01G345300.1 | Wheat | plastid | 43.37 | 37.96 |
| CDY25602 | Canola | nucleus | 43.69 | 37.92 |
| CDX89480 | Canola | nucleus | 43.37 | 37.75 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 42.72 | 37.61 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 43.37 | 37.43 |
| PGSC0003DMT400041637 | Potato | nucleus | 47.57 | 37.31 |
| KRH45568 | Soybean | nucleus | 41.75 | 37.28 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 41.75 | 37.18 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 41.42 | 36.99 |
| CDX76917 | Canola | nucleus | 42.07 | 36.72 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 42.39 | 36.59 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 41.42 | 36.57 |
| GSMUA_Achr10P... | Banana | nucleus | 40.45 | 36.34 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 40.78 | 36.31 |
| KRG99448 | Soybean | nucleus | 41.75 | 36.03 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 40.13 | 35.53 |
| Zm00001d018128_P001 | Maize | nucleus | 40.78 | 35.49 |
| Zm00001d052185_P001 | Maize | nucleus | 41.1 | 35.28 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 40.45 | 34.63 |
| EES07560 | Sorghum | nucleus | 39.48 | 34.08 |
| KXG19603 | Sorghum | nucleus | 37.22 | 33.05 |
| CDY11608 | Canola | nucleus | 31.72 | 30.91 |
| CDY38800 | Canola | nucleus | 30.74 | 29.78 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 24.27 | 29.76 |
| CDY67142 | Canola | nucleus | 32.04 | 29.2 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 15.53 | 27.91 |
| CDY59943 | Canola | nucleus | 31.72 | 27.15 |
| CDY22116 | Canola | nucleus | 24.6 | 25.5 |
| CDX83112 | Canola | nucleus | 28.8 | 25.28 |
| CDX68573 | Canola | nucleus | 28.48 | 25.0 |
| CDY21951 | Canola | nucleus | 24.27 | 24.83 |
| CDY02095 | Canola | nucleus | 26.21 | 24.7 |
| CDY17742 | Canola | nucleus | 28.16 | 24.51 |
| CDY30607 | Canola | nucleus | 27.83 | 24.36 |
| CDY23022 | Canola | nucleus | 25.89 | 24.32 |
| CDX76265 | Canola | nucleus | 28.16 | 23.84 |
| CDY57741 | Canola | nucleus | 27.83 | 23.56 |
| CDX72453 | Canola | nucleus | 26.86 | 23.06 |
| CDY49278 | Canola | nucleus | 27.51 | 23.04 |
| CDY69708 | Canola | nucleus | 27.83 | 22.99 |
| CDY12825 | Canola | nucleus | 26.54 | 22.91 |
| CDX75405 | Canola | nucleus | 27.51 | 22.79 |
| CDY01425 | Canola | nucleus | 25.24 | 22.03 |
| CDX90892 | Canola | nucleus | 10.03 | 20.39 |
| CDY29570 | Canola | nucleus | 21.04 | 19.46 |
| CDX72643 | Canola | nucleus | 21.04 | 19.12 |
| CDY10467 | Canola | cytosol | 19.42 | 17.7 |
| CDY40332 | Canola | cytosol | 19.42 | 17.65 |
| CDY55121 | Canola | cytosol | 17.8 | 16.04 |
| CDX80803 | Canola | cytosol | 18.12 | 12.42 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078HLT2 | UniProt:A0A078HLT2 | EnsemblPlants:CDY37828 | ProteinID:CDY37828 |
| ProteinID:CDY37828.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00064773001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EE0B3C |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng04890DBnaAnng04890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLT2]
Coordinates
chrLK032409:-:82619..84489
Molecular Weight (calculated)
34975.3 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.094
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENLELSLL CTETINVGDD DMIFGREVSN FQMGFPLESE EIIREMMEKE KQHLPSDDYI RRLRSGDMDF NARRRKALNW IFKRERERCC LKSACEVHQF
101: GPLCMCLSVN YFDRFLSVHD LPYDKAWTMQ LLAVACLSLA AKLEETSVPR LLIDLQVGHP EFLFVAKSIQ RMELLVVNRL EGRLRAITPC SYISYFLRKM
201: SKSDQEPSNT FISISLQVIA SKAKGIDFLE FRPSEVAAAV ALYVSGELHT VQFDNSSFSP LFSPLQKERV KKIGGMIESG GSGLCSQTPS GVFEVSASCF
301: SIKTHASSY
101: GPLCMCLSVN YFDRFLSVHD LPYDKAWTMQ LLAVACLSLA AKLEETSVPR LLIDLQVGHP EFLFVAKSIQ RMELLVVNRL EGRLRAITPC SYISYFLRKM
201: SKSDQEPSNT FISISLQVIA SKAKGIDFLE FRPSEVAAAV ALYVSGELHT VQFDNSSFSP LFSPLQKERV KKIGGMIESG GSGLCSQTPS GVFEVSASCF
301: SIKTHASSY
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKACE VHQFGPLCFC
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA CCFSFKTHDS
301: SSSYTHLS
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA CCFSFKTHDS
301: SSSYTHLS
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.