Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012146.1-P | Field mustard | nucleus | 98.31 | 98.31 |
| CDY12825 | Canola | nucleus | 94.35 | 93.3 |
| CDY23022 | Canola | nucleus | 64.12 | 69.0 |
| AT5G67260.2 | Thale cress | nucleus | 78.53 | 68.81 |
| CDY02095 | Canola | nucleus | 63.56 | 68.6 |
| CDX83112 | Canola | nucleus | 67.23 | 67.61 |
| CDX68573 | Canola | nucleus | 66.1 | 66.48 |
| CDY30607 | Canola | nucleus | 64.69 | 64.87 |
| CDY17742 | Canola | nucleus | 63.28 | 63.1 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 27.4 | 56.4 |
| KRH04529 | Soybean | nucleus | 52.82 | 50.4 |
| KRH57973 | Soybean | nucleus | 53.11 | 49.09 |
| Solyc02g092980.2.1 | Tomato | nucleus | 48.31 | 47.63 |
| KRH77050 | Soybean | nucleus, plastid | 44.63 | 47.31 |
| PGSC0003DMT400064307 | Potato | nucleus | 47.74 | 46.56 |
| PGSC0003DMT400031329 | Potato | nucleus | 42.09 | 46.27 |
| KRH28424 | Soybean | nucleus | 43.22 | 45.67 |
| CDX75405 | Canola | nucleus | 47.46 | 45.04 |
| CDY69708 | Canola | nucleus | 46.89 | 44.38 |
| PGSC0003DMT400068629 | Potato | cytosol | 29.94 | 44.17 |
| CDX76265 | Canola | nucleus | 45.48 | 44.11 |
| CDX72453 | Canola | nucleus | 44.35 | 43.61 |
| CDY57741 | Canola | nucleus | 44.92 | 43.56 |
| CDY49278 | Canola | nucleus | 45.2 | 43.36 |
| Solyc02g064900.1.1 | Tomato | nucleus | 40.96 | 41.91 |
| Solyc02g064910.1.1 | Tomato | nucleus | 27.4 | 41.28 |
| Solyc02g064860.1.1 | Tomato | nucleus | 27.4 | 41.28 |
| PGSC0003DMT400068627 | Potato | nucleus | 34.75 | 39.94 |
| PGSC0003DMT400011487 | Potato | nucleus | 20.06 | 38.59 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 31.92 | 31.22 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 33.62 | 30.67 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 29.66 | 30.43 |
| CDY38800 | Canola | nucleus | 27.4 | 30.41 |
| CDY11608 | Canola | nucleus | 27.12 | 30.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.84 | 29.97 |
| CDY13755 | Canola | nucleus | 24.58 | 29.79 |
| CDX81286 | Canola | nucleus | 22.32 | 29.7 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.66 | 29.66 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.9 | 29.48 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.38 | 29.38 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.38 | 29.38 |
| CDY54717 | Canola | nucleus | 22.03 | 29.32 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 28.81 | 29.06 |
| CDY67142 | Canola | nucleus | 27.68 | 28.91 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 32.77 | 28.5 |
| Os09t0111100-01 | Rice | cytosol | 28.53 | 27.75 |
| CDY59943 | Canola | nucleus | 27.68 | 27.15 |
| CDY14561 | Canola | cytosol | 24.86 | 27.08 |
| CDY08795 | Canola | nucleus | 23.45 | 26.95 |
| Zm00001d019696_P001 | Maize | cytosol | 28.25 | 25.84 |
| CDX76917 | Canola | nucleus | 25.71 | 25.71 |
| CDX97009 | Canola | nucleus | 21.19 | 25.6 |
| EER96424 | Sorghum | cytosol | 27.4 | 25.39 |
| CDX69832 | Canola | nucleus | 21.19 | 25.25 |
| CDY37828 | Canola | nucleus | 22.03 | 25.24 |
| CDX89480 | Canola | nucleus | 25.14 | 25.07 |
| Zm00001d005293_P001 | Maize | cytosol | 27.68 | 25.06 |
| CDY25602 | Canola | nucleus | 25.14 | 25.0 |
| CDY33959 | Canola | nucleus | 21.47 | 24.92 |
| CDY22116 | Canola | nucleus | 18.93 | 22.48 |
| CDY55121 | Canola | cytosol | 21.75 | 22.45 |
| CDY21951 | Canola | nucleus | 18.93 | 22.19 |
| CDY29570 | Canola | nucleus | 20.62 | 21.86 |
| CDX72643 | Canola | nucleus | 20.34 | 21.18 |
| CDY40332 | Canola | cytosol | 20.06 | 20.88 |
| CDY10467 | Canola | cytosol | 19.77 | 20.65 |
| CDX90892 | Canola | nucleus | 8.47 | 19.74 |
| CDX80803 | Canola | cytosol | 21.75 | 17.07 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | GO:A0A078EH56 | EnsemblPlants:CDY01425 | ProteinID:CDY01425 | ProteinID:CDY01425.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00112423001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EF257A | : | : | : | : | : |
Description
BnaA07g11980D
Coordinates
chrLK031926:-:985925..987417
Molecular Weight (calculated)
40937.1 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.223
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEKEQEES QTGQNAAFCA LDELYCEEEC GFAEEDLVGL DENVVKFQFL PLKDMFLWDD DELQSLISKE NEANHHPYQT LDECLVSRRK EALEWVLRVK
101: SHYGFASSTA LLAVNYFDRF ITSVRFQTDK PWMSQLVAVA CLSLAAKVEE IHVPLLIHLQ VEEARYVFEA KTIQKMELLL LSTLQWRMHP VTPISFFDHI
201: IRRLGSECHQ QLELFSNCER LLISVVTDAR FMSYVPSVLA TAIMIHVVKD LKPCEQVEYQ SQLMTLLKVN QEKVNECYEL LLEHNPSKKR MMNWLDQDSP
301: SGVFDLDDSS NGSWNVSAAS SSPEPLLKRR RVHEQQMRLP SINRMFLDVL SSPR
101: SHYGFASSTA LLAVNYFDRF ITSVRFQTDK PWMSQLVAVA CLSLAAKVEE IHVPLLIHLQ VEEARYVFEA KTIQKMELLL LSTLQWRMHP VTPISFFDHI
201: IRRLGSECHQ QLELFSNCER LLISVVTDAR FMSYVPSVLA TAIMIHVVKD LKPCEQVEYQ SQLMTLLKVN QEKVNECYEL LLEHNPSKKR MMNWLDQDSP
301: SGVFDLDDSS NGSWNVSAAS SSPEPLLKRR RVHEQQMRLP SINRMFLDVL SSPR
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.