Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012146.1-P | Field mustard | nucleus | 69.31 | 79.1 |
| CDY01425 | Canola | nucleus | 68.81 | 78.53 |
| CDY12825 | Canola | nucleus | 69.06 | 77.93 |
| AT3G50070.1 | Thale cress | nucleus | 61.63 | 68.98 |
| KRH04529 | Soybean | nucleus | 46.04 | 50.13 |
| Solyc02g092980.2.1 | Tomato | nucleus | 44.06 | 49.58 |
| PGSC0003DMT400064307 | Potato | nucleus | 44.06 | 49.04 |
| KRH57973 | Soybean | nucleus | 46.29 | 48.83 |
| PGSC0003DMT400031329 | Potato | nucleus | 38.61 | 48.45 |
| PGSC0003DMT400068629 | Potato | cytosol | 27.23 | 45.83 |
| KRH77050 | Soybean | nucleus, plastid | 37.87 | 45.81 |
| KRH28424 | Soybean | nucleus | 37.62 | 45.37 |
| AT4G34160.1 | Thale cress | nucleus | 42.08 | 45.21 |
| Solyc02g064900.1.1 | Tomato | nucleus | 37.38 | 43.64 |
| Solyc02g064910.1.1 | Tomato | nucleus | 25.0 | 42.98 |
| Solyc02g064860.1.1 | Tomato | nucleus | 25.0 | 42.98 |
| PGSC0003DMT400068627 | Potato | nucleus | 31.93 | 41.88 |
| PGSC0003DMT400011487 | Potato | nucleus | 18.81 | 41.3 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 28.22 | 31.49 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 30.2 | 31.44 |
| AT1G70210.1 | Thale cress | nucleus | 26.24 | 31.27 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 25.99 | 30.43 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 26.49 | 30.23 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 26.49 | 30.23 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 26.24 | 30.2 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 30.2 | 29.98 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 26.24 | 29.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.27 | 29.65 |
| AT2G22490.2 | Thale cress | nucleus | 25.99 | 29.01 |
| Os09t0111100-01 | Rice | cytosol | 25.5 | 28.3 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 28.22 | 28.01 |
| Zm00001d019696_P001 | Maize | cytosol | 25.99 | 27.13 |
| AT5G65420.3 | Thale cress | nucleus | 21.04 | 26.73 |
| EER96424 | Sorghum | cytosol | 24.75 | 26.18 |
| AT5G10440.1 | Thale cress | nucleus | 19.06 | 25.84 |
| Zm00001d005293_P001 | Maize | cytosol | 25.0 | 25.83 |
| AT4G03270.1 | Thale cress | nucleus | 18.32 | 24.5 |
| AT4G37630.1 | Thale cress | nucleus | 19.31 | 24.15 |
| AT5G02110.1 | Thale cress | cytosol | 20.05 | 23.75 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EntrezGene:836861 | UniProt:A0A1P8BEM5 | ProteinID:ANM70017.1 | ArrayExpress:AT5G67260 |
| EnsemblPlantsGene:AT5G67260 | RefSeq:AT5G67260 | TAIR:AT5G67260 | RefSeq:AT5G67260-TAIR-G | EnsemblPlants:AT5G67260.2 | Unigene:At.27278 |
| Symbol:CYCD3;2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | RefSeq:NP_001331659.1 | PFAM:PF00134 | PFAM:PF02984 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0008483CE1 | SEG:seg | : | : | : | : |
Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
Coordinates
chr5:+:26836140..26839597
Molecular Weight (calculated)
47287.9 Da
IEP (calculated)
4.693
GRAVY (calculated)
-0.231
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.