Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P09780_001 | Banana | cytosol | 62.15 | 50.77 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 48.9 | 44.93 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 49.21 | 43.09 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 52.68 | 41.03 |
| KRH05626 | Soybean | cytosol | 25.24 | 37.21 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 46.06 | 35.87 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 19.24 | 35.47 |
| PGSC0003DMT400068629 | Potato | cytosol | 26.5 | 35.0 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 37.54 | 33.62 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 36.91 | 33.33 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 36.91 | 33.05 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 36.91 | 33.05 |
| KRH15412 | Soybean | cytosol | 28.08 | 32.96 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 31.86 | 32.69 |
| Zm00001d019696_P001 | Maize | cytosol | 39.75 | 32.56 |
| Os09t0111100-01 | Rice | cytosol | 36.59 | 31.87 |
| EER96424 | Sorghum | cytosol | 37.85 | 31.41 |
| Zm00001d005293_P001 | Maize | cytosol | 37.85 | 30.69 |
| PGSC0003DMT400066557 | Potato | nucleus | 33.12 | 29.33 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 35.02 | 28.76 |
| CDY02095 | Canola | nucleus | 29.65 | 28.66 |
| Bra012909.1-P | Field mustard | nucleus | 29.65 | 28.66 |
| PGSC0003DMT400020648 | Potato | nucleus | 29.97 | 28.61 |
| KRH04529 | Soybean | nucleus | 33.12 | 28.3 |
| Solyc01g107730.2.1 | Tomato | nucleus | 32.49 | 28.3 |
| PGSC0003DMT400031329 | Potato | nucleus | 28.71 | 28.26 |
| CDY23022 | Canola | nucleus | 29.02 | 27.96 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 32.81 | 27.96 |
| KRH57973 | Soybean | nucleus | 33.75 | 27.94 |
| KRH77050 | Soybean | nucleus, plastid | 29.34 | 27.84 |
| KRH61348 | Soybean | nucleus | 30.6 | 27.79 |
| Solyc12g088650.1.1 | Tomato | nucleus | 28.39 | 27.69 |
| PGSC0003DMT400039904 | Potato | nucleus | 28.08 | 27.64 |
| KRH28424 | Soybean | nucleus | 29.02 | 27.46 |
| Solyc04g078470.2.1 | Tomato | nucleus | 29.02 | 27.38 |
| CDY30607 | Canola | nucleus | 30.28 | 27.2 |
| Bra012146.1-P | Field mustard | nucleus | 30.28 | 27.12 |
| CDY12825 | Canola | nucleus | 30.6 | 27.09 |
| Solyc02g092980.2.1 | Tomato | nucleus | 30.6 | 27.02 |
| Bra036051.1-P | Field mustard | nucleus | 29.97 | 26.91 |
| CDY57741 | Canola | nucleus | 30.91 | 26.85 |
| CDX76265 | Canola | nucleus | 30.91 | 26.85 |
| CDY01425 | Canola | nucleus | 29.97 | 26.84 |
| CDY49278 | Canola | nucleus | 31.23 | 26.83 |
| CDY17742 | Canola | nucleus | 29.97 | 26.76 |
| PGSC0003DMT400064307 | Potato | nucleus | 30.6 | 26.72 |
| CDX83112 | Canola | nucleus | 29.65 | 26.7 |
| Bra029992.1-P | Field mustard | nucleus | 29.65 | 26.7 |
| CDX72453 | Canola | nucleus | 30.28 | 26.67 |
| Bra017629.1-P | Field mustard | nucleus | 30.91 | 26.63 |
| Solyc02g064900.1.1 | Tomato | nucleus | 29.02 | 26.59 |
| CDX68573 | Canola | nucleus | 29.34 | 26.42 |
| VIT_00s0194g00280.t01 | Wine grape | mitochondrion | 23.66 | 26.32 |
| KRH52038 | Soybean | nucleus | 29.97 | 26.24 |
| Bra011501.1-P | Field mustard | nucleus | 30.6 | 26.01 |
| CDX75405 | Canola | nucleus | 30.6 | 26.01 |
| KRG90996 | Soybean | nucleus | 32.18 | 25.95 |
| CDY69708 | Canola | nucleus | 30.6 | 25.94 |
| Bra034612.1-P | Field mustard | nucleus | 29.97 | 25.82 |
| KRH35760 | Soybean | nucleus | 32.18 | 25.37 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 27.76 | 25.36 |
| AT4G34160.1 | Thale cress | nucleus | 29.97 | 25.27 |
| GSMUA_Achr10P... | Banana | nucleus | 25.55 | 25.23 |
| Solyc02g064910.1.1 | Tomato | nucleus | 18.61 | 25.11 |
| Solyc02g064860.1.1 | Tomato | nucleus | 18.61 | 25.11 |
| AT3G50070.1 | Thale cress | nucleus | 28.39 | 24.93 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 19.56 | 24.9 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 27.44 | 24.86 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 23.03 | 24.09 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 25.55 | 23.41 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 25.55 | 23.34 |
| GSMUA_Achr10P... | Banana | cytosol | 18.61 | 23.32 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 21.77 | 23.31 |
| AT5G67260.2 | Thale cress | nucleus | 29.65 | 23.27 |
| GSMUA_Achr10P... | Banana | nucleus | 24.92 | 22.97 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 25.55 | 22.63 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 25.55 | 22.44 |
| PGSC0003DMT400068627 | Potato | nucleus | 21.77 | 22.4 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 22.4 | 22.33 |
| GSMUA_Achr10P... | Banana | nucleus | 24.92 | 22.25 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 24.29 | 22.06 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 20.5 | 21.67 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 16.4 | 21.49 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 18.61 | 21.45 |
| GSMUA_Achr2P22330_001 | Banana | nucleus | 23.97 | 21.35 |
| GSMUA_Achr10P... | Banana | nucleus | 18.93 | 20.98 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 23.34 | 20.96 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 23.97 | 20.94 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 16.4 | 20.72 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 23.66 | 20.44 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 19.24 | 20.07 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 17.35 | 19.78 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 23.34 | 19.42 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 23.66 | 19.28 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 18.61 | 18.44 |
| PGSC0003DMT400011487 | Potato | nucleus | 9.78 | 16.85 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 20.82 | 15.64 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP01230_001 | EnsemblPlants:GSMUA_AchrUn_randomT01230_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG01230_001 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF342 | PFAM:PF00134 | SEG:seg | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI000296638D | UniProt:M0U5D5 | MapMan:13.1.1.1.4 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01230_001]
Coordinates
chrchrUn_random:+:4172204..4173157
Molecular Weight (calculated)
34999.8 Da
IEP (calculated)
6.655
GRAVY (calculated)
0.113
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLPLFDPL CCQEESLELE EERTGPLSPV HLLEDWAAVA EEEWVEALCS LATREGETRL PDGRGEHTYL LSARMEAVEW VARASERHLF SALTALLAVD
101: YLDRCFLTSS VAGGLRLQQD KPWMGRLAAV ACLSLAAKVE ETRVPLLLDL QLSLAAATAT EPEDNKFVFE AKTIRLMERL VLSSLGWRMN PVTPLSFIHH
201: LLPRLCPCSK DKNAISTTTA AARVRDLVNG CEAILLCVIA GECSAKRLLL LKHCSFCQSH IIIGSVRGRS EMDPLSCIHL GRGGAVRRFA GVPRDPPPHL
301: FPQRSKGWIL LPCLVPH
101: YLDRCFLTSS VAGGLRLQQD KPWMGRLAAV ACLSLAAKVE ETRVPLLLDL QLSLAAATAT EPEDNKFVFE AKTIRLMERL VLSSLGWRMN PVTPLSFIHH
201: LLPRLCPCSK DKNAISTTTA AARVRDLVNG CEAILLCVIA GECSAKRLLL LKHCSFCQSH IIIGSVRGRS EMDPLSCIHL GRGGAVRRFA GVPRDPPPHL
301: FPQRSKGWIL LPCLVPH
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRMFL DVLSSPR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.