Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P22570_001 | Banana | nucleus | 59.4 | 57.22 |
| KRH35652 | Soybean | nucleus | 44.69 | 54.3 |
| KRG91131 | Soybean | nucleus | 45.23 | 51.23 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 47.14 | 48.87 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 26.98 | 39.76 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 31.34 | 37.95 |
| GSMUA_Achr10P... | Banana | nucleus | 32.7 | 37.38 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 35.15 | 37.18 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 34.33 | 36.31 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 34.6 | 36.29 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 29.16 | 36.15 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 35.15 | 36.03 |
| GSMUA_Achr10P... | Banana | nucleus | 34.6 | 35.77 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 33.52 | 35.55 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 34.6 | 34.99 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 32.7 | 34.38 |
| GSMUA_Achr10P... | Banana | nucleus | 31.88 | 34.01 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 32.7 | 33.99 |
| GSMUA_Achr2P22330_001 | Banana | nucleus | 32.97 | 33.99 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 32.7 | 33.24 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 21.53 | 31.47 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 32.7 | 30.85 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 26.16 | 30.19 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 22.07 | 29.14 |
| GSMUA_Achr10P... | Banana | nucleus | 22.62 | 29.02 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 18.53 | 28.1 |
| GSMUA_Achr10P... | Banana | cytosol | 19.35 | 28.06 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 22.62 | 27.67 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 22.89 | 27.63 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 19.62 | 26.18 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 24.52 | 26.09 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 28.34 | 25.55 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 26.43 | 25.0 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 21.53 | 24.69 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 23.98 | 24.31 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 26.43 | 23.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.44 | 23.66 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 23.16 | 20.14 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr7G26100_001 | EnsemblPlants:GSMUA_Achr7P26100_001 |
| EnsemblPlants:GSMUA_Achr7T26100_001 | UniProt:M0TKU6 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF224 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000295132B |
| SEG:seg | : | : | : | : | : |
Description
Putative Cyclin-D1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G26100_001]
Coordinates
chr7:+:27510886..27512526
Molecular Weight (calculated)
39746.2 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.086
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSPDLFSA SSNLLLCAEN ADDVASWDGE EQDVEGGAAT VAATADKEWV PPALADDRAA IAALLAAEPD HLPRDDYLGR LHARAIDATA RQDAISWILK
101: ARAFYRFRPV TACLSVNYLD RFLSSHSLPN GKGGWPMQLL SVACVSVAAK MEESHVPLLL DLQLRDPTYV FEPRTIQRME LLLAAALRWR LRAVTPFDFL
201: HHLAASPAVA ALSPSSSSAL FSRAARLVLS THRVVDFLVY RPSVMAAAAF LCAANEMTES SATGTGDWSS CFDAWVSKGV VNRCRQLMEE RVIGTCPSSR
301: RGNTTECRGR PEPPRSPVGV LDSAACTSCD TGPRSEDGPE PRPAKRLRLG DHPCTDRVFT GLDGELL
101: ARAFYRFRPV TACLSVNYLD RFLSSHSLPN GKGGWPMQLL SVACVSVAAK MEESHVPLLL DLQLRDPTYV FEPRTIQRME LLLAAALRWR LRAVTPFDFL
201: HHLAASPAVA ALSPSSSSAL FSRAARLVLS THRVVDFLVY RPSVMAAAAF LCAANEMTES SATGTGDWSS CFDAWVSKGV VNRCRQLMEE RVIGTCPSSR
301: RGNTTECRGR PEPPRSPVGV LDSAACTSCD TGPRSEDGPE PRPAKRLRLG DHPCTDRVFT GLDGELL
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.