Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P22330_001 | Banana | nucleus | 71.67 | 71.07 |
| GSMUA_Achr10P... | Banana | nucleus | 69.69 | 69.3 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 70.54 | 68.59 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 60.34 | 60.86 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 42.49 | 60.24 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 58.64 | 59.31 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 57.22 | 58.38 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 58.92 | 58.1 |
| GSMUA_Achr10P... | Banana | nucleus | 52.69 | 57.94 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 56.94 | 57.93 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 56.37 | 57.35 |
| GSMUA_Achr10P... | Banana | nucleus | 55.81 | 57.27 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 56.66 | 55.4 |
| TraesCS6B01G345300.1 | Wheat | plastid | 51.27 | 51.27 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 50.71 | 51.0 |
| Zm00001d052185_P001 | Maize | nucleus | 50.99 | 50.0 |
| Zm00001d018128_P001 | Maize | nucleus | 50.14 | 49.86 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 50.42 | 49.72 |
| EES07560 | Sorghum | nucleus | 48.73 | 48.04 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 33.14 | 46.43 |
| KXG19603 | Sorghum | nucleus | 44.48 | 45.11 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 30.31 | 35.31 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 28.61 | 34.12 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 33.99 | 32.7 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 22.66 | 31.87 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 34.28 | 31.76 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 26.91 | 31.25 |
| GSMUA_Achr10P... | Banana | nucleus | 24.65 | 30.42 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 19.83 | 28.93 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 31.73 | 28.79 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 24.93 | 27.67 |
| GSMUA_Achr10P... | Banana | cytosol | 19.83 | 27.67 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 23.51 | 27.67 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 21.53 | 27.34 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 20.96 | 26.91 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 24.36 | 26.88 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 28.33 | 25.77 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 24.36 | 24.93 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 25.5 | 24.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.96 | 23.34 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 26.91 | 23.34 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 26.63 | 23.1 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 27.48 | 22.99 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr3G21210_001 | EnsemblPlants:GSMUA_Achr3P21210_001 |
| EnsemblPlants:GSMUA_Achr3T21210_001 | UniProt:M0SGI7 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000294CFB6 |
| SEG:seg | : | : | : | : | : |
Description
Cyclin-D3-1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21210_001]
Coordinates
chr3:+:22217556..22219142
Molecular Weight (calculated)
39225.9 Da
IEP (calculated)
6.990
GRAVY (calculated)
-0.119
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSFRYASS VLLSPEDSNG ILGLGDTEGQ DFHGEAARRD LWRFPDTRSG IYAGISVDFT LQSEDCVALM VERESQHLPQ GDYVKRLLRG QLDLAIRSDA
101: IDWIQKVHAH HRFGPLSAYL SVNYLDRFLS SYEHSQGKAW MTQLLSVACL SLAAKADETE VLSSLDLQIG EARYVFEART VQRMELLVLS TLKWRMQVVT
201: PFSFIDYFLY KFSDGIVPDS SLVSRSVGLI LGTVREIDFL EFRPSEIAAA VALTALKKTQ VLEVGKAVTC CNHVDMERVL RCNEVIQEMT LMKNRRYKKG
301: GSSVSTAPKS PIGVLDAACV SYESDDITVG SHANCHPSSP AAKRRKLNRS SSS
101: IDWIQKVHAH HRFGPLSAYL SVNYLDRFLS SYEHSQGKAW MTQLLSVACL SLAAKADETE VLSSLDLQIG EARYVFEART VQRMELLVLS TLKWRMQVVT
201: PFSFIDYFLY KFSDGIVPDS SLVSRSVGLI LGTVREIDFL EFRPSEIAAA VALTALKKTQ VLEVGKAVTC CNHVDMERVL RCNEVIQEMT LMKNRRYKKG
301: GSSVSTAPKS PIGVLDAACV SYESDDITVG SHANCHPSSP AAKRRKLNRS SSS
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.