Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P26100_001 | Banana | nucleus | 57.22 | 59.4 |
| KRH35652 | Soybean | nucleus | 38.06 | 48.01 |
| KRG91131 | Soybean | nucleus | 40.16 | 47.22 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 42.78 | 46.05 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 32.02 | 40.26 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 29.92 | 38.51 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 24.41 | 37.35 |
| GSMUA_Achr10P... | Banana | nucleus | 30.97 | 36.76 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 33.6 | 36.57 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 34.12 | 36.31 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 32.28 | 35.45 |
| GSMUA_Achr10P... | Banana | nucleus | 32.55 | 34.93 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 31.5 | 34.68 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 31.5 | 34.58 |
| GSMUA_Achr2P22330_001 | Banana | nucleus | 32.28 | 34.55 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 31.76 | 34.28 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 30.71 | 33.52 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 31.76 | 33.52 |
| GSMUA_Achr10P... | Banana | nucleus | 29.92 | 33.14 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 31.5 | 33.06 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 21.0 | 31.87 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 31.23 | 30.59 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 23.88 | 29.93 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 18.9 | 29.75 |
| GSMUA_Achr10P... | Banana | cytosol | 18.9 | 28.46 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 22.31 | 28.33 |
| GSMUA_Achr10P... | Banana | nucleus | 21.26 | 28.32 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 23.62 | 28.3 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 20.21 | 27.7 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 18.64 | 25.82 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 23.36 | 25.8 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 23.88 | 25.14 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 20.73 | 24.69 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 26.25 | 24.57 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 25.72 | 24.08 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 24.41 | 23.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.42 | 23.34 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 23.36 | 21.09 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr1G22570_001 | EnsemblPlants:GSMUA_Achr1P22570_001 |
| EnsemblPlants:GSMUA_Achr1T22570_001 | UniProt:M0S265 | PFAM:PF00134 | PFAM:PF02984 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF224 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002951347 | SEG:seg | : |
Description
Putative Cyclin-D1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G22570_001]
Coordinates
chr1:-:17008320..17010152
Molecular Weight (calculated)
40891.7 Da
IEP (calculated)
6.303
GRAVY (calculated)
-0.057
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSPDFFSS SNLLCTEDAS AVASGGEDRD HAVAASEWAP ACPATASALV DGRGLASLLA AETDHMPRPD YLPRFLSRTL DATARHDAVK WILKARYSLF
101: LLLYRFRALT AYLSVNYLDR FLSSHSLPNG GSGGGWPMQL LSVACVSVAA KMEETHVPSL LDLQILDQRY VFDPHTVGRM ELLLMTALGW RMRAITPFDF
201: LPHLVPSCPS ALLSRAADLI LSSLRVVDFL GYRPSAIAAA AALCAADEVA DPSAGGSADV LRCSDEWVNK QVVSGCRQLM EDYLIDTCPS APRSRAKTPY
301: ASREPQEPPP PPPPPRSPVA VLDAAACGSC DSAAQLPSAA EAATFDAHSL PVRPEAPPKR RRLGENRCTD TTCGCSQRKS I
101: LLLYRFRALT AYLSVNYLDR FLSSHSLPNG GSGGGWPMQL LSVACVSVAA KMEETHVPSL LDLQILDQRY VFDPHTVGRM ELLLMTALGW RMRAITPFDF
201: LPHLVPSCPS ALLSRAADLI LSSLRVVDFL GYRPSAIAAA AALCAADEVA DPSAGGSADV LRCSDEWVNK QVVSGCRQLM EDYLIDTCPS APRSRAKTPY
301: ASREPQEPPP PPPPPRSPVA VLDAAACGSC DSAAQLPSAA EAATFDAHSL PVRPEAPPKR RRLGENRCTD TTCGCSQRKS I
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.