Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35652 | Soybean | nucleus | 85.19 | 91.39 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 60.19 | 55.08 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 51.23 | 45.23 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 47.22 | 40.16 |
| KRH58137 | Soybean | nucleus | 37.96 | 38.68 |
| KRH69476 | Soybean | nucleus | 39.51 | 37.76 |
| KRH04404 | Soybean | vacuole | 38.58 | 36.76 |
| KRG99255 | Soybean | nucleus | 37.35 | 34.77 |
| KRH45743 | Soybean | nucleus | 38.27 | 34.44 |
| KRH74675 | Soybean | nucleus, plastid | 39.81 | 33.77 |
| KRH69654 | Soybean | cytosol | 24.69 | 32.92 |
| KRH05626 | Soybean | cytosol | 21.6 | 32.56 |
| KRH16827 | Soybean | nucleus | 34.26 | 31.27 |
| KRH62196 | Soybean | nucleus | 33.95 | 31.25 |
| KRH52917 | Soybean | nucleus | 33.95 | 31.25 |
| KRH45568 | Soybean | nucleus | 32.72 | 30.64 |
| KRH72435 | Soybean | nucleus | 33.64 | 30.53 |
| KRG99448 | Soybean | nucleus | 33.02 | 29.89 |
| KRH10729 | Soybean | nucleus | 24.69 | 29.41 |
| KRH28424 | Soybean | nucleus | 29.94 | 28.96 |
| KRH74510 | Soybean | nucleus | 32.1 | 28.81 |
| KRH21593 | Soybean | nucleus | 24.07 | 28.68 |
| KRH61348 | Soybean | nucleus | 29.94 | 27.79 |
| KRH61407 | Soybean | nucleus | 26.54 | 27.56 |
| KRH15412 | Soybean | cytosol | 22.84 | 27.41 |
| KRH52092 | Soybean | nucleus | 26.54 | 27.39 |
| KRH77050 | Soybean | nucleus, plastid | 28.09 | 27.25 |
| KRH28363 | Soybean | nucleus | 26.85 | 26.28 |
| KRH52038 | Soybean | nucleus | 29.32 | 26.24 |
| KRH77118 | Soybean | nucleus | 26.85 | 26.2 |
| KRH54628 | Soybean | cytosol | 12.35 | 26.14 |
| KRH54622 | Soybean | cytosol | 12.35 | 26.14 |
| KRH22479 | Soybean | cytosol | 25.0 | 25.63 |
| KRH26876 | Soybean | nucleus | 24.69 | 25.4 |
| KRH04529 | Soybean | nucleus | 29.01 | 25.34 |
| KRH65892 | Soybean | cytosol | 22.22 | 25.0 |
| KRH57973 | Soybean | nucleus | 29.32 | 24.8 |
| KRG90996 | Soybean | nucleus | 29.94 | 24.68 |
| KRH75669 | Soybean | cytosol | 21.6 | 24.22 |
| KRH35760 | Soybean | nucleus | 29.32 | 23.63 |
| KRH25470 | Soybean | nucleus | 22.84 | 22.84 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 23.15 | 22.8 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100776178 | MapMan:13.1.1.1.4 | EMBL:ACUP02012662 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_20G135400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1NG37 | EnsemblPlants:KRG91131 | ProteinID:KRG91131 | ProteinID:KRG91131.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF224 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000233DEF3 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr20:+:37486861..37489081
Molecular Weight (calculated)
35907.5 Da
IEP (calculated)
5.782
GRAVY (calculated)
-0.163
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSSTMPLS PDPPFLCTED ASEVTSDHHH PPSPFPDSDE AAIAGLLDAE THHMPEKDYL RRCRDRSVDV TARLDAVNWI LKVHAFYEFS PVTAFLSVNY
101: LDRFLSRCSL PQESGGWAFQ LLSVACLSLA AKMEESHVPF LLDLQLFQPK FVFEPKTVQR MELWVMSNLK WRLRSVTPFD YLHYFFTKLP SSSSQSITTA
201: SNLILSTTRV INFLGFAPST VAAAAVQCSA NGQLPLSFHD RLNSEMVRCC HQLMEEYVVD TCPASIKVRI TEAAAPSSPV GVLDAATCGS CDTPSERNFA
301: GSAEEQAEPP NKRLRSSASD APRR
101: LDRFLSRCSL PQESGGWAFQ LLSVACLSLA AKMEESHVPF LLDLQLFQPK FVFEPKTVQR MELWVMSNLK WRLRSVTPFD YLHYFFTKLP SSSSQSITTA
201: SNLILSTTRV INFLGFAPST VAAAAVQCSA NGQLPLSFHD RLNSEMVRCC HQLMEEYVVD TCPASIKVRI TEAAAPSSPV GVLDAATCGS CDTPSERNFA
301: GSAEEQAEPP NKRLRSSASD APRR
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.