CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04404	Soybean	vacuole	91.82	85.88
VIT_00s0322g00010.t01	Wine grape	nucleus	45.6	47.54
KRH35652	Soybean	nucleus	39.62	41.72
KRG91131	Soybean	nucleus	38.68	37.96
KRH69476	Soybean	nucleus	37.74	35.4
KRG99255	Soybean	nucleus	36.16	33.05
KRH45743	Soybean	nucleus	37.11	32.78
KRH05626	Soybean	cytosol	21.07	31.16
KRH74675	Soybean	nucleus, plastid	37.11	30.89
KRH52917	Soybean	nucleus	33.02	29.83
KRH69654	Soybean	cytosol	22.64	29.63
KRH61407	Soybean	nucleus	28.93	29.49
KRH10729	Soybean	nucleus	25.16	29.41
KRH21593	Soybean	nucleus	25.16	29.41
KRH16827	Soybean	nucleus	32.7	29.3
KRH62196	Soybean	nucleus	32.39	29.26
KRH72435	Soybean	nucleus	32.08	28.57
KRH52092	Soybean	nucleus	27.99	28.34
KRH04529	Soybean	nucleus	32.08	27.49
KRH45568	Soybean	nucleus	29.87	27.46
KRH15412	Soybean	cytosol	22.96	27.04
KRH61348	Soybean	nucleus	29.56	26.93
KRH28424	Soybean	nucleus	28.3	26.87
KRH74510	Soybean	nucleus	30.19	26.59
KRH28363	Soybean	nucleus	27.67	26.59
KRH52038	Soybean	nucleus	30.19	26.52
KRH77118	Soybean	nucleus	27.67	26.51
KRG99448	Soybean	nucleus	29.56	26.26
KRH57973	Soybean	nucleus	31.13	25.85
KRH77050	Soybean	nucleus, plastid	27.04	25.75
KRH65892	Soybean	cytosol	23.27	25.69
KRG90996	Soybean	nucleus	31.45	25.45
KRH54628	Soybean	cytosol	11.95	24.84
KRH54622	Soybean	cytosol	11.95	24.84
KRH35760	Soybean	nucleus	31.13	24.63
KRH75669	Soybean	cytosol	22.01	24.22
KRH25470	Soybean	nucleus	23.27	22.84
KRH56054	Soybean	cytosol, nucleus, plasma membrane	23.58	22.8
KRH22479	Soybean	cytosol	22.33	22.47
KRH26876	Soybean	nucleus	21.38	21.59

Protein Annotations

Gene3D:1.10.472.10	EntrezGene:100781193	MapMan:13.1.1.1.4	EMBL:ACUP02003204	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_C-dom	InterPro:Cyclin_N	EnsemblPlantsGene:GLYMA_05G106800	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:I1K2F2	EnsemblPlants:KRH58137	ProteinID:KRH58137	ProteinID:KRH58137.1	PFAM:PF00134
PFAM:PF02984	PIRSF:PIRSF001771	PANTHER:PTHR10177	PANTHER:PTHR10177:SF227	SMART:SM00385	SMART:SM01332
SUPFAM:SSF47954	UniParc:UPI0001BA88D9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:28384473..28386360

Molecular Weight (calculated)

36720.4 Da

IEP (calculated)

6.345

GRAVY (calculated)

-0.053

Length

318 amino acids

Sequence
(BLAST)

001: MSFDSSNHPI SPDLYCSEVT SEVIHLDSDD EALKFNVLWG DSDHDDSDDE SILLNLLESE HNQVQEQTKF LGQQLRKKTW LINAREEAIN WILKVHAYYS
101: FKPETAYLSV DYFNRFLLSH TFTQDKAWPL QLLSVTCLSL AAKMEESKVP LLLDLQVIES RFLFKPKTVQ RMELLVMASL KWRLRTITPF DFVHLFISKL
201: LCSASTWGDL SYIVSLVSDV IIRTCLVMDF LEFSPSTIAA AALLWVTNQC VDDKKSYCLH KNISIEMVKK CYKLMKQKLI IRRSELYWPK ISQLLPRSPT
301: CVLDHAAAMQ ESSDAHKL

Best Arabidopsis Sequence Match ( AT1G70210.1 )
(BLAST)

001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN

Arabidopsis Description

CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.