Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45743 | Soybean | nucleus | 95.11 | 91.94 |
| KRH69476 | Soybean | nucleus | 79.31 | 81.42 |
| VIT_01s0026g00710.t01 | Wine grape | nucleus | 70.4 | 75.62 |
| KRH74675 | Soybean | nucleus, plastid | 79.02 | 71.99 |
| Solyc05g006050.2.1 | Tomato | nucleus | 62.64 | 64.69 |
| PGSC0003DMT400040287 | Potato | nucleus | 62.36 | 64.58 |
| AT1G70210.1 | Thale cress | nucleus | 60.34 | 61.95 |
| CDY11608 | Canola | nucleus | 56.03 | 61.51 |
| CDY38800 | Canola | nucleus | 56.32 | 61.44 |
| Bra007901.1-P | Field mustard | nucleus | 57.18 | 58.7 |
| CDY67142 | Canola | nucleus | 57.18 | 58.7 |
| CDY59943 | Canola | nucleus | 58.62 | 56.51 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 42.82 | 50.34 |
| TraesCS5B01G199100.1 | Wheat | nucleus | 44.54 | 48.44 |
| TraesCS5A01G200500.2 | Wheat | nucleus | 44.83 | 48.15 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 41.67 | 47.85 |
| Os09t0382300-00 | Rice | nucleus | 42.24 | 47.73 |
| OQU89443 | Sorghum | nucleus | 44.25 | 46.25 |
| HORVU5Hr1G059770.2 | Barley | nucleus | 44.83 | 43.7 |
| TraesCS5D01G206200.1 | Wheat | nucleus | 45.4 | 43.05 |
| Os06t0236600-00 | Rice | nucleus | 42.24 | 40.5 |
| Zm00001d020353_P001 | Maize | nucleus | 38.51 | 40.48 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 45.11 | 40.36 |
| KRH35652 | Soybean | nucleus | 33.62 | 38.74 |
| KRG91131 | Soybean | nucleus | 34.77 | 37.35 |
| KRH58137 | Soybean | nucleus | 33.05 | 36.16 |
| KRH04404 | Soybean | vacuole | 33.91 | 34.71 |
| KRH05626 | Soybean | cytosol | 21.26 | 34.42 |
| KRH69654 | Soybean | cytosol | 23.28 | 33.33 |
| KRH52917 | Soybean | nucleus | 33.62 | 33.24 |
| KRH16827 | Soybean | nucleus | 33.33 | 32.68 |
| KRH62196 | Soybean | nucleus | 32.76 | 32.39 |
| KRH72435 | Soybean | nucleus | 32.76 | 31.93 |
| KRH10729 | Soybean | nucleus | 24.71 | 31.62 |
| KRH21593 | Soybean | nucleus | 24.43 | 31.25 |
| KRH74510 | Soybean | nucleus | 31.03 | 29.92 |
| KRH61407 | Soybean | nucleus | 26.72 | 29.81 |
| KRH45568 | Soybean | nucleus | 29.6 | 29.77 |
| KRH15412 | Soybean | cytosol | 22.99 | 29.63 |
| KRH61348 | Soybean | nucleus | 29.6 | 29.51 |
| KRG99448 | Soybean | nucleus | 30.17 | 29.33 |
| KRH28363 | Soybean | nucleus | 27.87 | 29.31 |
| KRH77118 | Soybean | nucleus | 27.87 | 29.22 |
| KRH52092 | Soybean | nucleus | 26.15 | 28.98 |
| KRH28424 | Soybean | nucleus | 27.87 | 28.96 |
| KRH04529 | Soybean | nucleus | 29.89 | 28.03 |
| KRH22479 | Soybean | cytosol | 25.29 | 27.85 |
| KRH52038 | Soybean | nucleus | 28.74 | 27.62 |
| KRH77050 | Soybean | nucleus, plastid | 26.44 | 27.54 |
| KRH57973 | Soybean | nucleus | 30.17 | 27.42 |
| KRH26876 | Soybean | nucleus | 24.71 | 27.3 |
| KRH25470 | Soybean | nucleus | 25.0 | 26.85 |
| KRG90996 | Soybean | nucleus | 29.89 | 26.46 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 25.0 | 26.44 |
| KRH35760 | Soybean | nucleus | 29.6 | 25.62 |
| KRH65892 | Soybean | cytosol | 20.4 | 24.65 |
| KRH75669 | Soybean | cytosol | 20.11 | 24.22 |
| KRH54622 | Soybean | cytosol | 10.06 | 22.88 |
| KRH54628 | Soybean | cytosol | 10.06 | 22.88 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100818190 | MapMan:13.1.1.1.4 | EMBL:ACUP02011017 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_18G133100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1N1D2 | ProteinID:KRG99254.1 | EnsemblPlants:KRG99255 | ProteinID:KRG99255 | ProteinID:KRG99255.1 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF206 |
| SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000233E85C | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:+:18870134..18874817
Molecular Weight (calculated)
39038.7 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.097
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAESPPGLL MSVSCLSDYD LLCGEDSSGI LSGESPECSF SDIDSSPPPP SPTTEDCYSI ASFIEHERNF VPGFEYLSRF QSRSLDANAR EESVGWILKV
101: HAYYGFQPLT AYLAVNYMDR FLDSRRLPET NGWPLQLVSV ACLSLAAKME EPLVPSLLDL QIEGAKYIFE PRTIRRMELL VLGVLDWRLR SVTPLCFLAF
201: FACKVDSTGT FIRFLISRAT EIIVSNIQEA SFLAYWPSCI AAAAILTAAN EIPNWSVVKP ENAESWCEGL RKEKVIGCYQ LMQELVINNN QRKLPTKVLP
301: QLRVTTRTRM RSSTVSSFSS SSSTSFSLSC KRRKLNNRLW VDDKGNSE
101: HAYYGFQPLT AYLAVNYMDR FLDSRRLPET NGWPLQLVSV ACLSLAAKME EPLVPSLLDL QIEGAKYIFE PRTIRRMELL VLGVLDWRLR SVTPLCFLAF
201: FACKVDSTGT FIRFLISRAT EIIVSNIQEA SFLAYWPSCI AAAAILTAAN EIPNWSVVKP ENAESWCEGL RKEKVIGCYQ LMQELVINNN QRKLPTKVLP
301: QLRVTTRTRM RSSTVSSFSS SSSTSFSLSC KRRKLNNRLW VDDKGNSE
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.