Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16827 | Soybean | nucleus | 93.28 | 93.8 |
| KRH52917 | Soybean | nucleus | 67.79 | 68.75 |
| KRH62196 | Soybean | nucleus | 65.27 | 66.19 |
| VIT_18s0001g07220.t01 | Wine grape | nucleus | 63.31 | 63.66 |
| Solyc04g076040.2.1 | Tomato | nucleus | 59.1 | 59.44 |
| PGSC0003DMT400033588 | Potato | nucleus | 57.7 | 57.87 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 39.5 | 56.63 |
| GSMUA_Achr10P... | Banana | nucleus | 51.82 | 53.78 |
| GSMUA_Achr10P... | Banana | nucleus | 47.9 | 53.27 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 52.94 | 52.79 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 51.26 | 52.74 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 51.26 | 52.29 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 49.58 | 51.01 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 49.86 | 51.0 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 49.3 | 50.87 |
| KRH74510 | Soybean | nucleus | 50.14 | 49.58 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 49.3 | 48.75 |
| TraesCS6B01G345300.1 | Wheat | plastid | 48.18 | 48.73 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 47.9 | 48.72 |
| KRH45568 | Soybean | nucleus | 46.5 | 47.98 |
| Solyc12g087900.1.1 | Tomato | nucleus | 42.02 | 47.47 |
| PGSC0003DMT400088718 | Potato | nucleus | 40.9 | 47.1 |
| KRH69654 | Soybean | cytosol | 31.93 | 46.91 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 46.78 | 46.65 |
| EES07560 | Sorghum | nucleus | 46.5 | 46.37 |
| Zm00001d052185_P001 | Maize | nucleus | 46.5 | 46.11 |
| KRG99448 | Soybean | nucleus | 45.94 | 45.81 |
| Zm00001d018128_P001 | Maize | nucleus | 44.54 | 44.79 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 30.25 | 42.86 |
| KXG19603 | Sorghum | nucleus | 38.1 | 39.08 |
| KRH69476 | Soybean | nucleus | 34.73 | 36.58 |
| KRH35652 | Soybean | nucleus | 30.25 | 35.76 |
| KRH05626 | Soybean | cytosol | 20.45 | 33.95 |
| KRG91131 | Soybean | nucleus | 30.53 | 33.64 |
| KRH21593 | Soybean | nucleus | 25.21 | 33.09 |
| KRG99255 | Soybean | nucleus | 31.93 | 32.76 |
| KRH22479 | Soybean | cytosol | 28.85 | 32.59 |
| KRH45743 | Soybean | nucleus | 32.49 | 32.22 |
| KRH58137 | Soybean | nucleus | 28.57 | 32.08 |
| KRH26876 | Soybean | nucleus | 28.29 | 32.06 |
| KRH74675 | Soybean | nucleus, plastid | 34.17 | 31.94 |
| KRH10729 | Soybean | nucleus | 24.09 | 31.62 |
| KRH28424 | Soybean | nucleus | 29.41 | 31.34 |
| KRH04529 | Soybean | nucleus | 32.49 | 31.27 |
| KRH15412 | Soybean | cytosol | 23.25 | 30.74 |
| KRH04404 | Soybean | vacuole | 29.13 | 30.59 |
| KRH25470 | Soybean | nucleus | 27.73 | 30.56 |
| KRH61348 | Soybean | nucleus | 29.69 | 30.37 |
| KRH77050 | Soybean | nucleus, plastid | 28.29 | 30.24 |
| KRH61407 | Soybean | nucleus | 26.33 | 30.13 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 27.73 | 30.09 |
| KRH52038 | Soybean | nucleus | 30.25 | 29.83 |
| KRH57973 | Soybean | nucleus | 31.93 | 29.77 |
| KRH52092 | Soybean | nucleus | 26.05 | 29.62 |
| KRH28363 | Soybean | nucleus | 27.45 | 29.61 |
| KRH77118 | Soybean | nucleus | 26.61 | 28.61 |
| KRH54628 | Soybean | cytosol | 11.76 | 27.45 |
| KRH54622 | Soybean | cytosol | 11.76 | 27.45 |
| KRG90996 | Soybean | nucleus | 29.97 | 27.23 |
| KRH35760 | Soybean | nucleus | 30.25 | 26.87 |
| KRH65892 | Soybean | cytosol | 20.73 | 25.69 |
| KRH75669 | Soybean | cytosol | 20.45 | 25.26 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100812660 | MapMan:13.1.1.1.4 | EMBL:ACUP02001212 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_02G212400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1JGY3 | EnsemblPlants:KRH72435 | ProteinID:KRH72435 | ProteinID:KRH72435.1 | PFAM:PF00134 |
| PFAM:PF02984 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF213 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0002337332 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:39816629..39820574
Molecular Weight (calculated)
39955.3 Da
IEP (calculated)
4.614
GRAVY (calculated)
-0.252
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSFDCVSS LLCVEDNSIF DENDYGGSVE VLEDAWQDPR YRRNLSQSEN LDVPNGWFQL QSDECLRLMV EKEWDHLPNG DYRNKLRSGD LDFEARKEAI
101: DWIQKVQEHF GFGPVCAYLS INYLDRFLSA YELPKHRTWT MQLLAVGCLS LAAKMEETDA PMSLDLQVGE SKYIFEAKTI QRMELLVLST LRWRMQAITP
201: FSFIDHFLYK INDDQSPIGA SILQSIQLIL STVRGIDFLE FRPSEIAAAV AISVVGEGQT VQTEKAISVL IQLVEKERVL KCVKLIQELA SNSGGGSAKG
301: DSASVSVPSV PQSPIGVLNT ECFSYKSDDT NAASCANTSH NNSPDAKRRK LNKTFGE
101: DWIQKVQEHF GFGPVCAYLS INYLDRFLSA YELPKHRTWT MQLLAVGCLS LAAKMEETDA PMSLDLQVGE SKYIFEAKTI QRMELLVLST LRWRMQAITP
201: FSFIDHFLYK INDDQSPIGA SILQSIQLIL STVRGIDFLE FRPSEIAAAV AISVVGEGQT VQTEKAISVL IQLVEKERVL KCVKLIQELA SNSGGGSAKG
301: DSASVSVPSV PQSPIGVLNT ECFSYKSDDT NAASCANTSH NNSPDAKRRK LNKTFGE
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.