Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91131 | Soybean | nucleus | 91.39 | 85.19 |
| VIT_03s0091g01060.t01 | Wine grape | nucleus | 63.91 | 54.52 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 54.3 | 44.69 |
| KRH58137 | Soybean | nucleus | 41.72 | 39.62 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 48.01 | 38.06 |
| KRH04404 | Soybean | vacuole | 42.05 | 37.35 |
| KRH69476 | Soybean | nucleus | 40.73 | 36.28 |
| KRG99255 | Soybean | nucleus | 38.74 | 33.62 |
| KRH45743 | Soybean | nucleus | 39.07 | 32.78 |
| KRH74675 | Soybean | nucleus, plastid | 41.39 | 32.72 |
| KRH69654 | Soybean | cytosol | 25.5 | 31.69 |
| KRH16827 | Soybean | nucleus | 36.09 | 30.7 |
| KRH45568 | Soybean | nucleus | 35.1 | 30.64 |
| KRH52917 | Soybean | nucleus | 35.43 | 30.4 |
| KRH72435 | Soybean | nucleus | 35.76 | 30.25 |
| KRH05626 | Soybean | cytosol | 21.52 | 30.23 |
| KRH62196 | Soybean | nucleus | 35.1 | 30.11 |
| KRG99448 | Soybean | nucleus | 35.43 | 29.89 |
| KRH10729 | Soybean | nucleus | 26.16 | 29.04 |
| KRH74510 | Soybean | nucleus | 34.11 | 28.53 |
| KRH61407 | Soybean | nucleus | 29.47 | 28.53 |
| KRH28424 | Soybean | nucleus | 31.13 | 28.06 |
| KRH52092 | Soybean | nucleus | 29.14 | 28.03 |
| KRH21593 | Soybean | nucleus | 25.17 | 27.94 |
| KRH61348 | Soybean | nucleus | 31.79 | 27.51 |
| KRH77050 | Soybean | nucleus, plastid | 29.8 | 26.95 |
| KRH52038 | Soybean | nucleus | 32.12 | 26.8 |
| KRH15412 | Soybean | cytosol | 23.51 | 26.3 |
| KRH28363 | Soybean | nucleus | 28.48 | 25.98 |
| KRH77118 | Soybean | nucleus | 28.48 | 25.9 |
| KRH65892 | Soybean | cytosol | 24.17 | 25.35 |
| KRH04529 | Soybean | nucleus | 31.13 | 25.34 |
| KRH57973 | Soybean | nucleus | 31.79 | 25.07 |
| KRG90996 | Soybean | nucleus | 32.45 | 24.94 |
| KRH54628 | Soybean | cytosol | 12.58 | 24.84 |
| KRH54622 | Soybean | cytosol | 12.58 | 24.84 |
| KRH22479 | Soybean | cytosol | 25.83 | 24.68 |
| KRH26876 | Soybean | nucleus | 25.5 | 24.44 |
| KRH75669 | Soybean | cytosol | 23.18 | 24.22 |
| KRH35760 | Soybean | nucleus | 31.46 | 23.63 |
| KRH25470 | Soybean | nucleus | 24.17 | 22.53 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 24.5 | 22.49 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100798996 | MapMan:13.1.1.1.4 | EMBL:ACUP02006696 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_10G256200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1LED4 | EnsemblPlants:KRH35652 | ProteinID:KRH35652 | ProteinID:KRH35652.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF224 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00023CD171 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:48306531..48308768
Molecular Weight (calculated)
33576.1 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.078
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSSTMPLS PDPPFLCADE AAIAGLLDAE PHHMPEKDYL RRCRDRSVDV TARLDAVNWI LKVHAYYEFS PVTAFLSVNY FDRFLSRCSL PQQSGGWAFQ
101: LLSVACLSLA AKMEESHVPF LLDLQLFEPK FVFEPKTIQR MELWVMSNLK WRLRSVTPFD YLHYFISKLP SSSSSQSLNH FFSTSSNLIL STTRVINFLG
201: FAPSTVAAAA VLCSANGQLP LSFHDRVNDE MVRCCHQLME EYVVDTCPAS VKARITEPAP PSSPVGVLDA ATCGSCDTPS DRNFAGPPNK RLRSSASDAP
301: QR
101: LLSVACLSLA AKMEESHVPF LLDLQLFEPK FVFEPKTIQR MELWVMSNLK WRLRSVTPFD YLHYFISKLP SSSSSQSLNH FFSTSSNLIL STTRVINFLG
201: FAPSTVAAAA VLCSANGQLP LSFHDRVNDE MVRCCHQLME EYVVDTCPAS VKARITEPAP PSSPVGVLDA ATCGSCDTPS DRNFAGPPNK RLRSSASDAP
301: QR
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.