Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52917 | Soybean | nucleus | 91.48 | 91.48 |
| KRH16827 | Soybean | nucleus | 66.48 | 65.92 |
| KRH72435 | Soybean | nucleus | 66.19 | 65.27 |
| VIT_18s0001g07220.t01 | Wine grape | nucleus | 58.24 | 57.75 |
| PGSC0003DMT400033588 | Potato | nucleus | 56.25 | 55.62 |
| Solyc04g076040.2.1 | Tomato | nucleus | 55.68 | 55.21 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 37.5 | 53.01 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 50.28 | 50.57 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 48.58 | 49.28 |
| GSMUA_Achr10P... | Banana | nucleus | 47.16 | 48.26 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 47.44 | 48.13 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 48.86 | 48.04 |
| GSMUA_Achr10P... | Banana | nucleus | 43.47 | 47.66 |
| KRH74510 | Soybean | nucleus | 48.58 | 47.37 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 46.31 | 47.11 |
| PGSC0003DMT400088718 | Potato | nucleus | 41.19 | 46.77 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 46.31 | 46.7 |
| KRH45568 | Soybean | nucleus | 45.74 | 46.53 |
| Solyc12g087900.1.1 | Tomato | nucleus | 41.76 | 46.52 |
| KRG99448 | Soybean | nucleus | 46.88 | 46.09 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 46.88 | 45.71 |
| TraesCS6B01G345300.1 | Wheat | plastid | 44.89 | 44.76 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 44.32 | 44.44 |
| KRH69654 | Soybean | cytosol | 30.68 | 44.44 |
| Zm00001d018128_P001 | Maize | nucleus | 44.6 | 44.23 |
| Zm00001d052185_P001 | Maize | nucleus | 45.17 | 44.17 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 44.6 | 43.85 |
| EES07560 | Sorghum | nucleus | 44.03 | 43.3 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 26.14 | 36.51 |
| KRH69476 | Soybean | nucleus | 34.94 | 36.28 |
| KXG19603 | Sorghum | nucleus | 35.23 | 35.63 |
| KRH35652 | Soybean | nucleus | 30.11 | 35.1 |
| KRH05626 | Soybean | cytosol | 21.02 | 34.42 |
| KRG91131 | Soybean | nucleus | 31.25 | 33.95 |
| KRH45743 | Soybean | nucleus | 33.52 | 32.78 |
| KRG99255 | Soybean | nucleus | 32.39 | 32.76 |
| KRH58137 | Soybean | nucleus | 29.26 | 32.39 |
| KRH21593 | Soybean | nucleus | 24.72 | 31.99 |
| KRH04529 | Soybean | nucleus | 33.24 | 31.54 |
| KRH74675 | Soybean | nucleus, plastid | 34.09 | 31.41 |
| KRH28424 | Soybean | nucleus | 29.55 | 31.04 |
| KRH04404 | Soybean | vacuole | 29.83 | 30.88 |
| KRH15412 | Soybean | cytosol | 23.58 | 30.74 |
| KRH61348 | Soybean | nucleus | 30.4 | 30.66 |
| KRH10729 | Soybean | nucleus | 23.3 | 30.15 |
| KRH57973 | Soybean | nucleus | 32.67 | 30.03 |
| KRH77050 | Soybean | nucleus, plastid | 28.41 | 29.94 |
| KRH61407 | Soybean | nucleus | 26.42 | 29.81 |
| KRH52038 | Soybean | nucleus | 30.4 | 29.56 |
| KRH22479 | Soybean | cytosol | 26.14 | 29.11 |
| KRH52092 | Soybean | nucleus | 25.57 | 28.66 |
| KRH26876 | Soybean | nucleus | 25.28 | 28.25 |
| KRH25470 | Soybean | nucleus | 25.28 | 27.47 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 25.28 | 27.05 |
| KRG90996 | Soybean | nucleus | 30.11 | 26.97 |
| KRH35760 | Soybean | nucleus | 30.68 | 26.87 |
| KRH28363 | Soybean | nucleus | 25.0 | 26.59 |
| KRH54628 | Soybean | cytosol | 11.36 | 26.14 |
| KRH54622 | Soybean | cytosol | 11.36 | 26.14 |
| KRH77118 | Soybean | nucleus | 23.86 | 25.3 |
| KRH65892 | Soybean | cytosol | 18.75 | 22.92 |
| KRH75669 | Soybean | cytosol | 18.47 | 22.49 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100792867 | MapMan:13.1.1.1.4 | EMBL:ACUP02002227 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_04G092800 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1JV43 | EnsemblPlants:KRH62196 | ProteinID:KRH62196 | ProteinID:KRH62196.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF213 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI00023397E2 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:8187556..8190394
Molecular Weight (calculated)
39321.3 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.107
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSFDFASS LLCTEDSAVF DESHNNGGTM MSMMGVYEDT WSPRKRHFDE EPDELPLLSD ESLAMMVEKE CQHWPGLRCL NKLQTGDLDF GARMEAVDWI
101: LKVRSHFGYC SRSSLVIQNY LDRFLCAYEL PKGRVWTMQL LAVACLSLAA KLDETEVPLS LDLQVGESKF LFEAKTIQRM ELLVLSTLKW RMQAITPFTF
201: LDYFLCKIND DQSPLRSSIM RSIQLISSTA RGIDFLEFKP SEIAAAVAMY VMGETQTVDT GKATSFLIQH VEKERLLKCV KMIQELSCNS GSAKDSSASV
301: TCLPQSPIGV LDALCFSYKS DDTNAGSSVN SSHNSPVAKR RKLNKTCGAD LL
101: LKVRSHFGYC SRSSLVIQNY LDRFLCAYEL PKGRVWTMQL LAVACLSLAA KLDETEVPLS LDLQVGESKF LFEAKTIQRM ELLVLSTLKW RMQAITPFTF
201: LDYFLCKIND DQSPLRSSIM RSIQLISSTA RGIDFLEFKP SEIAAAVAMY VMGETQTVDT GKATSFLIQH VEKERLLKCV KMIQELSCNS GSAKDSSASV
301: TCLPQSPIGV LDALCFSYKS DDTNAGSSVN SSHNSPVAKR RKLNKTCGAD LL
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.