Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58137 | Soybean | nucleus | 85.88 | 91.82 |
| VIT_00s0322g00010.t01 | Wine grape | nucleus | 44.12 | 49.18 |
| KRH35652 | Soybean | nucleus | 37.35 | 42.05 |
| KRG91131 | Soybean | nucleus | 36.76 | 38.58 |
| KRH69476 | Soybean | nucleus | 35.59 | 35.69 |
| KRG99255 | Soybean | nucleus | 34.71 | 33.91 |
| KRH45743 | Soybean | nucleus | 35.59 | 33.61 |
| KRH05626 | Soybean | cytosol | 20.29 | 32.09 |
| KRH74675 | Soybean | nucleus, plastid | 35.59 | 31.68 |
| KRH52917 | Soybean | nucleus | 31.47 | 30.4 |
| KRH69654 | Soybean | cytosol | 21.47 | 30.04 |
| KRH16827 | Soybean | nucleus | 31.18 | 29.86 |
| KRH62196 | Soybean | nucleus | 30.88 | 29.83 |
| KRH61407 | Soybean | nucleus | 27.35 | 29.81 |
| KRH72435 | Soybean | nucleus | 30.59 | 29.13 |
| KRH10729 | Soybean | nucleus | 22.94 | 28.68 |
| KRH21593 | Soybean | nucleus | 22.94 | 28.68 |
| KRH52092 | Soybean | nucleus | 26.47 | 28.66 |
| KRH15412 | Soybean | cytosol | 22.65 | 28.52 |
| KRH45568 | Soybean | nucleus | 28.53 | 28.03 |
| KRH04529 | Soybean | nucleus | 30.0 | 27.49 |
| KRH61348 | Soybean | nucleus | 27.94 | 27.22 |
| KRG99448 | Soybean | nucleus | 28.53 | 27.09 |
| KRH74510 | Soybean | nucleus | 28.53 | 26.87 |
| KRH28424 | Soybean | nucleus | 26.47 | 26.87 |
| KRH52038 | Soybean | nucleus | 28.53 | 26.8 |
| KRH28363 | Soybean | nucleus | 25.88 | 26.59 |
| KRH57973 | Soybean | nucleus | 29.71 | 26.37 |
| KRH77118 | Soybean | nucleus | 25.59 | 26.2 |
| KRH77050 | Soybean | nucleus, plastid | 25.59 | 26.05 |
| KRH65892 | Soybean | cytosol | 21.18 | 25.0 |
| KRG90996 | Soybean | nucleus | 28.82 | 24.94 |
| KRH35760 | Soybean | nucleus | 28.53 | 24.13 |
| KRH54628 | Soybean | cytosol | 10.59 | 23.53 |
| KRH54622 | Soybean | cytosol | 10.59 | 23.53 |
| KRH75669 | Soybean | cytosol | 20.0 | 23.53 |
| KRH25470 | Soybean | nucleus | 21.76 | 22.84 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 22.06 | 22.8 |
| KRH22479 | Soybean | cytosol | 21.18 | 22.78 |
| KRH26876 | Soybean | nucleus | 20.0 | 21.59 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EMBL:ACUP02010413 | ncoils:Coil | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_17G160000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:K7MLX7 | EnsemblPlants:KRH04404 | ProteinID:KRH04404 | ProteinID:KRH04404.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF227 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | TMHMM:TMhelix | UniParc:UPI0002966EF0 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:-:13844890..13846743
Molecular Weight (calculated)
39298.9 Da
IEP (calculated)
6.730
GRAVY (calculated)
0.044
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYMIDRVFI LVFFYTFLIS IMSLDSSSNH PIIPDLYCSE VTSEVIHLDS DDEAMKLNVL WGDSDHDDSD ESILLSLLES EHDQVQEQTK SLGQQLRKKT
101: WLINAREEAI NWILKVHAYY SFKPETAYLS VDYFNRFLLS HTLTPDKAWP LQLLSVACLA LAAKMEERKV PLLLDLQVIE SRFLFKPKTV QRMELLVMAS
201: LKWRLRTITP FDFVHLFIAK LPCSASTWRD LSYIVSRVSD VIIRTCLVMD FLEFSPSTIA AAALLWVTNQ CADEKKSECF HKNIGIEMVQ KCYKLMKQKL
301: IIRRSGLYWP KTLQLLPRSP TCVLDHAAAM QESSDAHHKL
101: WLINAREEAI NWILKVHAYY SFKPETAYLS VDYFNRFLLS HTLTPDKAWP LQLLSVACLA LAAKMEERKV PLLLDLQVIE SRFLFKPKTV QRMELLVMAS
201: LKWRLRTITP FDFVHLFIAK LPCSASTWRD LSYIVSRVSD VIIRTCLVMD FLEFSPSTIA AAALLWVTNQ CADEKKSECF HKNIGIEMVQ KCYKLMKQKL
301: IIRRSGLYWP KTLQLLPRSP TCVLDHAAAM QESSDAHHKL
001: MRSYRFSDYL HMSVSFSNDM DLFCGEDSGV FSGESTVDFS SSEVDSWPGD SIACFIEDER HFVPGHDYLS RFQTRSLDAS AREDSVAWIL KVQAYYNFQP
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
101: LTAYLAVNYM DRFLYARRLP ETSGWPMQLL AVACLSLAAK MEEILVPSLF DFQVAGVKYL FEAKTIKRME LLVLSVLDWR LRSVTPFDFI SFFAYKIDPS
201: GTFLGFFISH ATEIILSNIK EASFLEYWPS SIAAAAILCV ANELPSLSSV VNPHESPETW CDGLSKEKIV RCYRLMKAMA IENNRLNTPK VIAKLRVSVR
301: ASSTLTRPSD ESSFSSSSPC KRRKLSGYSW VGDETSTSN
Arabidopsis Description
CYCD1-1Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.