Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54628 | Soybean | cytosol | 100.0 | 100.0 |
| KRH75669 | Soybean | cytosol | 88.24 | 46.71 |
| KRH65892 | Soybean | cytosol | 83.66 | 44.44 |
| VIT_08s0007g00790.t01 | Wine grape | nucleus | 40.52 | 18.34 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 30.72 | 17.09 |
| KRH69654 | Soybean | cytosol | 26.8 | 16.87 |
| GSMUA_Achr10P... | Banana | cytosol | 27.45 | 16.6 |
| KRH05626 | Soybean | cytosol | 22.22 | 15.81 |
| CDY10467 | Canola | cytosol | 33.99 | 15.34 |
| Bra009612.1-P | Field mustard | cytosol | 33.99 | 15.29 |
| CDY40332 | Canola | cytosol | 33.99 | 15.29 |
| Bra005708.1-P | Field mustard | cytosol | 33.33 | 14.87 |
| CDY55121 | Canola | cytosol | 33.33 | 14.87 |
| AT5G02110.1 | Thale cress | cytosol | 31.37 | 14.08 |
| KRH10729 | Soybean | nucleus | 23.53 | 13.24 |
| TraesCS4B01G140400.1 | Wheat | cytosol, nucleus, plastid | 28.1 | 12.95 |
| KRH21593 | Soybean | nucleus | 22.88 | 12.87 |
| TraesCS4A01G177400.1 | Wheat | cytosol | 27.45 | 12.61 |
| KRH15412 | Soybean | cytosol | 22.22 | 12.59 |
| KRH35652 | Soybean | nucleus | 24.84 | 12.58 |
| KRH74510 | Soybean | nucleus | 29.41 | 12.47 |
| KRG91131 | Soybean | nucleus | 26.14 | 12.35 |
| Os11t0706801-00 | Rice | nucleus | 25.49 | 12.19 |
| KRH58137 | Soybean | nucleus | 24.84 | 11.95 |
| KRH16827 | Soybean | nucleus | 27.45 | 11.83 |
| KRH72435 | Soybean | nucleus | 27.45 | 11.76 |
| KRH52917 | Soybean | nucleus | 26.8 | 11.65 |
| TraesCS4D01G135100.1 | Wheat | cytosol, nucleus, plastid | 25.49 | 11.57 |
| KRH45568 | Soybean | nucleus | 26.14 | 11.56 |
| OQU84124 | Sorghum | nucleus | 32.03 | 11.48 |
| KRH61348 | Soybean | nucleus | 26.14 | 11.46 |
| KRH62196 | Soybean | nucleus | 26.14 | 11.36 |
| KRH52038 | Soybean | nucleus | 26.8 | 11.33 |
| KRH61407 | Soybean | nucleus | 22.88 | 11.22 |
| KRH69476 | Soybean | nucleus | 24.84 | 11.21 |
| KRH52092 | Soybean | nucleus | 22.88 | 11.15 |
| Zm00001d048594_P001 | Maize | cytosol | 30.72 | 11.06 |
| CDX80803 | Canola | cytosol | 32.03 | 10.86 |
| KRH04529 | Soybean | nucleus | 26.14 | 10.78 |
| KRG99448 | Soybean | nucleus | 24.84 | 10.61 |
| KRH04404 | Soybean | vacuole | 23.53 | 10.59 |
| KRG99255 | Soybean | nucleus | 22.88 | 10.06 |
| KRH45743 | Soybean | nucleus | 23.53 | 10.0 |
| KRH77118 | Soybean | nucleus | 21.57 | 9.94 |
| KRH57973 | Soybean | nucleus | 24.84 | 9.92 |
| KRH74675 | Soybean | nucleus, plastid | 24.18 | 9.69 |
| KRH28363 | Soybean | nucleus | 20.91 | 9.67 |
| KRH26876 | Soybean | nucleus | 19.61 | 9.52 |
| KRH22479 | Soybean | cytosol | 19.61 | 9.49 |
| KRH28424 | Soybean | nucleus | 20.26 | 9.25 |
| KRH77050 | Soybean | nucleus, plastid | 18.95 | 8.68 |
| KRH25470 | Soybean | nucleus | 17.65 | 8.33 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 17.65 | 8.21 |
| KRG90996 | Soybean | nucleus | 20.91 | 8.14 |
| KRH35760 | Soybean | nucleus | 20.26 | 7.71 |
Protein Annotations
| EMBL:ACUP02003552 | EMBL:ACUP02003555 | EnsemblPlants:KRH54622 | EnsemblPlantsGene:GLYMA_06G198800 | Gene3D:1.10.472.10 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_N | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF215 | PFAM:PF00134 | ProteinID:KRH54622 |
| ProteinID:KRH54622.1 | ProteinID:KRH54628.1 | SUPFAM:SSF47954 | UniParc:UPI0006EDFE00 | UniProt:A0A0R0JTC7 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr6:-:18080507..18081371
Molecular Weight (calculated)
18070.8 Da
IEP (calculated)
4.655
GRAVY (calculated)
0.231
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLLCDEVW LSKSANTFEE VISDPVALKS YENEEFEEVF AVCLEKEVLC LPEPDYTKYL HYNNFIFPSC RVIQWFIKCR SHFNLSFGIV FLTINYLHRF
101: VSICQCNDWE YWMLELLSIA CLSIAIKLNE ISGLSLHEIQ VTNCHYIHHS LFI
101: VSICQCNDWE YWMLELLSIA CLSIAIKLNE ISGLSLHEIQ VTNCHYIHHS LFI
001: MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I
Arabidopsis Description
CYCD7-1Putative cyclin-D7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.