Factsheet for Os11t0706801-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0843700-01
Os02t0123100-01
Os03t0146300-01
Os03t0822400-01
Os04t0382100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02110.1	Os03t0146300-01	AT2G27960.1	20706207
AT5G02110.1	Os03t0146300-01	AT2G27970.1	20706207
AT5G02110.1	Os02t0123100-01	AT3G48750.1	20706207
AT5G02110.1	Os01t0843700-01	AT5G02220.1	20706207
AT5G02110.1	Os03t0822400-01	AT5G02220.1	20706207
AT5G02110.1	Os04t0382100-01	AT5G14170.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G177400.1	Wheat	cytosol	53.44	51.35
TraesCS4D01G135100.1	Wheat	cytosol, nucleus, plastid	53.44	50.74
TraesCS4B01G140400.1	Wheat	cytosol, nucleus, plastid	52.5	50.6
OQU84124	Sorghum	nucleus	54.06	40.52
GSMUA_Achr10P...	Banana	cytosol	31.56	39.92
GSMUA_Achr6P34040_001	Banana	nucleus	33.75	39.27
Zm00001d048594_P001	Maize	cytosol	51.56	38.82
KRH65892	Soybean	cytosol	23.75	26.39
KRH75669	Soybean	cytosol	23.75	26.3
VIT_08s0007g00790.t01	Wine grape	nucleus	27.5	26.04
KRH54622	Soybean	cytosol	12.19	25.49
KRH54628	Soybean	cytosol	12.19	25.49
Os09t0382300-00	Rice	nucleus	23.44	24.35
Os07t0620800-01	Rice	nucleus	26.56	23.88
CDY40332	Canola	cytosol	25.31	23.82
Bra009612.1-P	Field mustard	cytosol	25.31	23.82
CDY10467	Canola	cytosol	24.69	23.3
Os03t0392000-00	Rice	cytosol, nucleus, plastid	17.19	22.36
CDY55121	Canola	cytosol	23.75	22.16
Bra005708.1-P	Field mustard	cytosol	23.44	21.87
Os09t0111100-01	Rice	cytosol	23.75	20.88
AT5G02110.1	Thale cress	cytosol	22.19	20.82
Os08t0479300-01	Rice	nucleus	24.06	20.1
Os09t0466100-01	Rice	nucleus	22.19	19.94
Os07t0556000-01	Rice	cytosol	19.69	19.69
Os06t0236600-00	Rice	nucleus	20.62	18.18
CDX80803	Canola	cytosol	24.69	17.52
Os03t0617500-01	Rice	cytosol, nucleus	20.31	17.29
Os12t0588800-01	Rice	nucleus	19.69	17.26
Os03t0203800-01	Rice	nucleus	17.5	16.23

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	ProteinID:AAX95283.1	ProteinID:AAX95412.1	ProteinID:ABA95520.1	ProteinID:BAT15414.1
InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	ProteinID:EAZ19328.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0051301	EnsemblPlantsGene:Os11g0706801	EnsemblPlants:Os11t0706801-00	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771
PANTHER:PTHR10177	PANTHER:PTHR10177:SF215	UniProt:Q53MB7	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954
UniParc:UPI00005092B6	SEG:seg	:	:	:	:

Description

CYCLIN-D7-1Putative cyclin-D7-1. (Os11t0706801-00)

Coordinates

chr11:-:28921418..28923592

Molecular Weight (calculated)

35985.0 Da

IEP (calculated)

6.176

GRAVY (calculated)

-0.234

Length

320 amino acids

Sequence
(BLAST)

001: MDDDDDTSFN NSLDLYCDED PFDSTPPPPP PPPEQQQQAG TTTPDDIDDE VMEYYKAKQR CYALQIRDYC CYLQCHHLLL QQQQHGVAAA RLKAAMGRLG
101: LEAATAFNAA NYLDRFLSIN CHLKWEEWMV EVVSVGCLSL ACKLDEVTIP SLHDLQMEEA MGHSFRASTI RDMELTLLKA LRWRLACVTP FSFLPVTTTT
201: TTTRALLLRS LLDPSFLRFD ASLLAASALT LSSTTPQHPN HLLLNRLIHP FSQTDHEVKE CFNMMKALHL DMSKNPGRSS DHPCWSPISV VIPFHTDGTV
301: KRSAISRCLF GSGRLKARSI

Best Arabidopsis Sequence Match ( AT5G02110.1 )
(BLAST)

001: MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I

Arabidopsis Description

CYCD7-1Putative cyclin-D7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.