Factsheet for Bra005708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006242.1-P
Bra009606.1-P
Bra018036.1-P
Bra025573.1-P
Bra028880.1-P
Bra029917.1-P
Bra034380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02110.1	Bra034380.1-P	AT2G27970.1	20706207
AT5G02110.1	Bra018036.1-P	AT3G48750.1	20706207
AT5G02110.1	Bra029917.1-P	AT3G48750.1	20706207
AT5G02110.1	Bra009606.1-P	AT5G02220.1	20706207
AT5G02110.1	Bra028880.1-P	AT5G02220.1	20706207
AT5G02110.1	Bra006242.1-P	AT5G14170.1	20706207
AT5G02110.1	Bra025573.1-P	AT5G40460.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55121	Canola	cytosol	98.83	98.83
Bra009612.1-P	Field mustard	cytosol	76.68	77.35
AT5G02110.1	Thale cress	cytosol	64.14	64.52
KRH65892	Soybean	cytosol	30.32	36.11
KRH75669	Soybean	cytosol	30.32	35.99
VIT_08s0007g00790.t01	Wine grape	nucleus	33.24	33.73
KRH54628	Soybean	cytosol	14.87	33.33
KRH54622	Soybean	cytosol	14.87	33.33
GSMUA_Achr10P...	Banana	cytosol	22.45	30.43
GSMUA_Achr6P34040_001	Banana	nucleus	21.57	26.91
TraesCS4A01G177400.1	Wheat	cytosol	25.07	25.83
TraesCS4B01G140400.1	Wheat	cytosol, nucleus, plastid	24.49	25.3
TraesCS4D01G135100.1	Wheat	cytosol, nucleus, plastid	24.2	24.63
Os11t0706801-00	Rice	nucleus	21.87	23.44
Bra007901.1-P	Field mustard	nucleus	22.16	22.42
Bra038518.1-P	Field mustard	nucleus	18.95	22.41
Bra012909.1-P	Field mustard	nucleus	20.7	21.65
Bra036051.1-P	Field mustard	nucleus	22.16	21.53
Bra012146.1-P	Field mustard	nucleus	21.87	21.19
Bra029992.1-P	Field mustard	nucleus	21.57	21.02
Bra024383.1-P	Field mustard	nucleus	18.37	20.45
Bra030232.1-P	Field mustard	nucleus	20.99	20.28
Bra037817.1-P	Field mustard	nucleus	16.62	20.21
Bra009031.1-P	Field mustard	nucleus	17.49	20.2
OQU84124	Sorghum	nucleus	25.07	20.14
Zm00001d048594_P001	Maize	cytosol	24.78	20.0
Bra034612.1-P	Field mustard	nucleus	20.7	19.29
Bra017629.1-P	Field mustard	nucleus	20.41	19.02
Bra011501.1-P	Field mustard	nucleus	20.41	18.77
Bra034198.1-P	Field mustard	nucleus	16.04	18.46
Bra031858.1-P	Field mustard	nucleus	15.45	17.73
Bra017840.1-P	Field mustard	nucleus	15.16	15.25

Protein Annotations

EnsemblPlants:Bra005708.1	EnsemblPlants:Bra005708.1-P	EnsemblPlantsGene:Bra005708	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_N	PANTHER:PTHR10177	PANTHER:PTHR10177:SF215	PFAM:PF00134	PIRSF:PIRSF001771	SMART:SM00385
SUPFAM:SSF47954	UniParc:UPI000253FA3C	UniProt:M4CNC0	MapMan:13.1.1.1.4	:	:

Description

AT5G02110 (E=3e-120) CYCD7;1, CYCD7 | CYCD7;1 (CYCLIN D7;1); cyclin-dependent protein kinase

Coordinates

chrA03:+:222585..224303

Molecular Weight (calculated)

39250.5 Da

IEP (calculated)

5.285

GRAVY (calculated)

-0.130

Length

343 amino acids

Sequence
(BLAST)

001: MDNLLCDESW LSDPLTPEPV PNFRLNIHDD HVVMSPGIDA ATVEEAISID LEKESCFSNH GHKFVEFLAS KKLIDARFRT VQWLIQTRSR LNLSFETLFS
101: AANCFDRFVN VISCDEWSKW MVELVAVTSL SVASKFNDVA SPSPQELQME GLTHMFHHKT VLEMELILLK ALDWRVNSVT SLFFSQILMT KMGIVEGDIM
201: MNRITEHLLD DLCDLKMLGY APSVVAVAAM WTVLEEKSAL EENFGKIMNL FGQEQKENIA KCINVMKSRN VEKGWGRKIS EVKSLVSVLQ RGDMMNMNDV
301: YHGGDLSAIF QILRSEGINK KRDRDYYEDK FRPAKRMTFV MSD

Best Arabidopsis Sequence Match ( AT5G02110.1 )
(BLAST)

001: MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I

Arabidopsis Description

CYCD7-1Putative cyclin-D7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.